DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-8 and set-10

DIOPT Version :9

Sequence 1:NP_001014717.1 Gene:SmydA-8 / 31200 FlyBaseID:FBgn0053548 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_493620.2 Gene:set-10 / 185237 WormBaseID:WBGene00009370 Length:430 Species:Caenorhabditis elegans


Alignment Length:403 Identity:75/403 - (18%)
Similarity:132/403 - (32%) Gaps:109/403 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 QERALVTGPTARKGQLSSCICCHETLPQTGFL----------CRHRCTLPVCETCSDSEEHQAEC 137
            |..|.|..|...:...::|....::..:|..|          |..:|.....::|     ||.||
 Worm     8 QPLAAVLSPQFSELYCATCFLEIDSSQETEILTCDDCLAVSYCTLKCQRKDWKSC-----HQFEC 67

  Fly   138 EHFRRWQPKDVDAEQEQVNPMSLRILTAVRVFHLGKEQR--HLVDAMQANAERAYRREIIQAAQC 200
            |..|.         |....||:|.:...:||....:..:  ....|:..:.|..|:.        
 Worm    68 EILRC---------QGSSTPMTLTMKLCIRVLLASRSTQTPSFNGAVLEDLETNYKE-------- 115

  Fly   201 FRNFPTTDRVFMDQLFRIVGVLNTNAFEAP--------------CRSGG------HETLLRGLFP 245
            ||:.|..:: |:..:..|:.....|.|...              |.|..      .|.:..||:.
 Worm   116 FRSSPEHNQ-FLSDVLTIISSSGQNIFPTSLETNKTIGIICSVLCNSFSIINEKRVEPIGSGLYV 179

  Fly   246 LTAIMNHECTPNASHYFENGRLAVVRAARDIPKGGEITTTYTKILWGNLTRNIFLKMTKHFACDC 310
            ..|..||.|...:...||..::.:.....:..|  |:|.:|...:.....|...::......|.|
 Worm   180 GVAKHNHSCASTSHVVFEGNQVFLRTNQEEYSK--ELTISYVSRMLPTSERRKTIRGVHFLTCQC 242

  Fly   311 VRCHDNTENGTYLSALFCREQGCRGLVIPVQTRTLQPDWRCITCENVFPHAKMAKYQDFALNTIN 375
            ..|.:...:...||:. ||.:.|.|.|        :....|..||      |:| :..|. .:|:
 Worm   243 EMCKNEELDLIGLSSK-CRTKNCTGFV--------KGSGNCSVCE------KLA-FLPFE-QSIH 290

  Fly   376 NRINSCSVQDMIHFINELCPRFCPSSNYVLIEAKLNVIWRMTRFDHEEYTPEEMGHMDRYREEVL 440
            :.:|...:.:.:|..|:..                              |.:|:.::.:.|.:..
 Worm   291 STLNLLDIIENLHKTNQFT------------------------------TVQELAYLQKLRADYQ 325

  Fly   441 AILHKLGAGECTL 453
            .||     .||.:
 Worm   326 DIL-----AECNV 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-8NP_001014717.1 SET <189..293 CDD:214614 23/123 (19%)
set-10NP_493620.2 zf-MYND 23..67 CDD:366792 8/48 (17%)
SET 57..247 CDD:394802 42/214 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D981799at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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