DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-8 and set-10

DIOPT Version :10

Sequence 1:NP_001014717.1 Gene:SmydA-8 / 31200 FlyBaseID:FBgn0053548 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_493620.2 Gene:set-10 / 185237 WormBaseID:WBGene00009370 Length:430 Species:Caenorhabditis elegans


Alignment Length:403 Identity:75/403 - (18%)
Similarity:132/403 - (32%) Gaps:109/403 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 QERALVTGPTARKGQLSSCICCHETLPQTGFL----------CRHRCTLPVCETCSDSEEHQAEC 137
            |..|.|..|...:...::|....::..:|..|          |..:|.....::|     ||.||
 Worm     8 QPLAAVLSPQFSELYCATCFLEIDSSQETEILTCDDCLAVSYCTLKCQRKDWKSC-----HQFEC 67

  Fly   138 EHFRRWQPKDVDAEQEQVNPMSLRILTAVRVFHLGKEQR--HLVDAMQANAERAYRREIIQAAQC 200
            |..|.         |....||:|.:...:||....:..:  ....|:..:.|..|:.        
 Worm    68 EILRC---------QGSSTPMTLTMKLCIRVLLASRSTQTPSFNGAVLEDLETNYKE-------- 115

  Fly   201 FRNFPTTDRVFMDQLFRIVGVLNTNAFEAP--------------CRSGG------HETLLRGLFP 245
            ||:.|..:: |:..:..|:.....|.|...              |.|..      .|.:..||:.
 Worm   116 FRSSPEHNQ-FLSDVLTIISSSGQNIFPTSLETNKTIGIICSVLCNSFSIINEKRVEPIGSGLYV 179

  Fly   246 LTAIMNHECTPNASHYFENGRLAVVRAARDIPKGGEITTTYTKILWGNLTRNIFLKMTKHFACDC 310
            ..|..||.|...:...||..::.:.....:..|  |:|.:|...:.....|...::......|.|
 Worm   180 GVAKHNHSCASTSHVVFEGNQVFLRTNQEEYSK--ELTISYVSRMLPTSERRKTIRGVHFLTCQC 242

  Fly   311 VRCHDNTENGTYLSALFCREQGCRGLVIPVQTRTLQPDWRCITCENVFPHAKMAKYQDFALNTIN 375
            ..|.:...:...||:. ||.:.|.|.|        :....|..||      |:| :..|. .:|:
 Worm   243 EMCKNEELDLIGLSSK-CRTKNCTGFV--------KGSGNCSVCE------KLA-FLPFE-QSIH 290

  Fly   376 NRINSCSVQDMIHFINELCPRFCPSSNYVLIEAKLNVIWRMTRFDHEEYTPEEMGHMDRYREEVL 440
            :.:|...:.:.:|..|:..                              |.:|:.::.:.|.:..
 Worm   291 STLNLLDIIENLHKTNQFT------------------------------TVQELAYLQKLRADYQ 325

  Fly   441 AILHKLGAGECTL 453
            .||     .||.:
 Worm   326 DIL-----AECNV 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-8NP_001014717.1 SET 58..>88 CDD:394802 2/4 (50%)
SET_SMYD <224..313 CDD:380997 20/108 (19%)
set-10NP_493620.2 zf-MYND 23..67 CDD:460312 8/48 (17%)
SET 57..247 CDD:394802 42/214 (20%)

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