DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SmydA-8 and SMYD1

DIOPT Version :10

Sequence 1:NP_001014717.1 Gene:SmydA-8 / 31200 FlyBaseID:FBgn0053548 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_938015.1 Gene:SMYD1 / 150572 HGNCID:20986 Length:490 Species:Homo sapiens


Alignment Length:417 Identity:93/417 - (22%)
Similarity:156/417 - (37%) Gaps:96/417 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 GRGVFATRDIAAGELIFQERA--------LVTGPTARKGQLSSCICCHETLPQTGFLCRHRC--- 119
            |||:.||::..|.::||.|||        ||.            ..||....:...|  |||   
Human    18 GRGLKATKEFWAADIIFAERAYSAVVFDSLVN------------FVCHTCFKRQEKL--HRCGQC 68

  Fly   120 -TLPVCE-TCSDSE--EHQAECEHFRRWQPKDVDAEQEQVNPMSLRILTAVRVFHLGKEQRHL-- 178
             ....|: ||....  .|:.||...:|:.    ....|.:. ::.||:..|.....|..:..|  
Human    69 KFAHYCDRTCQKDAWLNHKNECSAIKRYG----KVPNENIR-LAARIMWRVEREGTGLTEGCLVS 128

  Fly   179 VDAMQANAE---RAYRREIIQAAQCFRNF--PTTDRVFMDQLFRIVGVLNTNAFEAPCRSGGHET 238
            ||.:|.:.|   ...::::......|..:  |.:.:..|..:..|.||:|.|.|....:. |.:.
Human   129 VDDLQNHVEHFGEEEQKDLRVDVDTFLQYWPPQSQQFSMQYISHIFGVINCNGFTLSDQR-GLQA 192

  Fly   239 LLRGLFPLTAIMNHECTPNASHYFENGRLAVV------------RAARDIPKGGEITTTYTKILW 291
            :..|:||...::||:|.||.:..|.||....|            ||...|.:|.|:|.:|...|.
Human   193 VGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFLN 257

  Fly   292 GNLTRNIFLKMTKHFACDCVRCHDNTENGTYLSALFCREQGCRGLVIPVQTRTLQPDWRCITCEN 356
            .:..|...||...:|.|.|..|....::..:|...                            :|
Human   258 VSEERKRQLKKQYYFDCTCEHCQKKLKDDLFLGVK----------------------------DN 294

  Fly   357 VFPHAKMAKYQ-DFALNTINNRINSCSVQDMIHFINELC--------PRFCPSSNYVL--IEAKL 410
            ..|..::.|.. .|:.:|: .:|:....:.:.|.:.:||        |.|..::.|:|  :....
Human   295 PKPSQEVVKEMIQFSKDTL-EKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNIYMLRMLSIVS 358

  Fly   411 NVIWRMTRFDHEEYTPEEM--GHMDRY 435
            .|:..:..|:...:....|  |:|..|
Human   359 EVLSYLQAFEEASFYARRMVDGYMKLY 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-8NP_001014717.1 SET 58..>88 CDD:394802 11/29 (38%)
SET_SMYD <224..313 CDD:380997 29/100 (29%)
SMYD1NP_938015.1 SET_SMYD1 7..281 CDD:380924 73/282 (26%)
zf-MYND 52..90 CDD:460312 10/39 (26%)

Return to query results.
Submit another query.