DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-8 and smyd2

DIOPT Version :9

Sequence 1:NP_001014717.1 Gene:SmydA-8 / 31200 FlyBaseID:FBgn0053548 Length:462 Species:Drosophila melanogaster
Sequence 2:XP_002934751.2 Gene:smyd2 / 100495522 XenbaseID:XB-GENE-985583 Length:430 Species:Xenopus tropicalis


Alignment Length:420 Identity:101/420 - (24%)
Similarity:151/420 - (35%) Gaps:121/420 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 GRGVFATRDIAAGELIFQERALVTGPT------------ARKGQLSSCICCHETLPQTGFLCRHR 118
            |||:.|||..|.|||:|...|.....|            |||..||.|..|.:     .|.|...
 Frog    16 GRGLKATRPFALGELLFSCPAYTYVLTVNERGNHCEFCFARKEGLSKCGKCKQ-----AFYCNVD 75

  Fly   119 CTLPVCETCSDSEEHQAECE----HFRRWQPKD-------VDAEQE-QVNPMSLRILTAVRVF-- 169
            |..      .|...|:.||.    :.:.|.|.:       :.|:|: |....:.....:|:.|  
 Frog    76 CQK------GDWPMHKLECSAMCTYGQNWCPSETVRLTARILAKQKTQTERTASERFLSVKDFES 134

  Fly   170 HLGK---EQRHLVDAMQANAERAYRREI---IQAAQCFRNFPTTDRVFMDQLFRIVGVLNTNAFE 228
            ||.|   |:..|:....|...|.|.:.:   ..|||.|             ||..|   |.|.|.
 Frog   135 HLSKLDNEKLELIQNDIAALHRFYSKNLHYSDNAAQVF-------------LFAQV---NCNGFT 183

  Fly   229 APCRSGGHETLLRGLFPLTAIMNHECTPNASHYFENGRLAVVRAARDIPKGGEITTTYTKILWGN 293
            .......|  |...:||..|:|||.|.||....:: |.:|.|||.::|..|.|:.|:|..:|:..
 Frog   184 IEDEELSH--LGSAIFPDVALMNHSCCPNVIVTYK-GTVAEVRAVQEIHAGDEVFTSYIDLLYPT 245

  Fly   294 LTRNIFLKMTKHFACDCVRCHDNTENGTYLSALFCREQGCRGLVIPVQTRTLQPDWRCITCENVF 358
            ..||..|..:..|.|||..|                           .|:...|           
 Frog   246 EDRNDRLIDSYFFNCDCREC---------------------------STKQKDP----------- 272

  Fly   359 PHAKMAKYQDFALNTINNRINSCSVQDMIHFINELCPRFCPSSNYVLIEAKLNVIWRMTRFDHEE 423
              ||:      .:..:::..:...|:|||.:...:...|..:.:|......|.:.         |
 Frog   273 --AKL------EIRKLSDPPSPQVVRDMIKYARNVVEEFRRAKHYKTPSELLEIC---------E 320

  Fly   424 YTPEEMGHMDRYREEVLAILHKL--GAGEC 451
            .:.|:||.:  :.:..:.:||.:  ..|.|
 Frog   321 LSLEKMGSV--FEDSNVYMLHMMYQAMGVC 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-8NP_001014717.1 SET <189..293 CDD:214614 33/106 (31%)
smyd2XP_002934751.2 zf-MYND 50..88 CDD:280009 12/48 (25%)
SET 145..238 CDD:279228 34/111 (31%)
TPR_12 336..409 CDD:290160 4/13 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D981799at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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