DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-8 and smyd3

DIOPT Version :9

Sequence 1:NP_001014717.1 Gene:SmydA-8 / 31200 FlyBaseID:FBgn0053548 Length:462 Species:Drosophila melanogaster
Sequence 2:XP_031758360.1 Gene:smyd3 / 100494527 XenbaseID:XB-GENE-854970 Length:448 Species:Xenopus tropicalis


Alignment Length:301 Identity:69/301 - (22%)
Similarity:113/301 - (37%) Gaps:86/301 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 GRGVFATRDIAAGELIFQERALVTGP---------TA------RKGQLSSCICCHETLPQTGFLC 115
            |.||.|.:|::.|..:     ::..|         ||      ||.:|..|..|     :....|
 Frog    35 GNGVRALKDMSHGLTV-----MIAEPYVYTVCRIKTACDHCLHRKEKLLRCSQC-----KVARYC 89

  Fly   116 RHRCTLPVCETCSDSEEHQAECEHFRRWQPKDVDAEQEQVNPMSLRILTAV-------------R 167
            ...|.....      :.|:.||:..|...|        .|.|.|:|::..:             .
 Frog    90 NSHCQRKAW------QGHKRECKCLRSTLP--------NVPPNSVRLVGKIIFKMLQKPDTASEE 140

  Fly   168 VFHLGKEQRHLVDAMQ---------ANAERAYRREIIQAAQCFRNFPTTDRVFMDQL---FRIVG 220
            ::.:...|.|:.:|.:         |.|.:.|.:|.||.              :.||   |:::.
 Frog   141 LYTISDLQSHIKEASEEVKDGLRHLATALQHYLKEEIQE--------------ISQLPPGFQVLE 191

  Fly   221 VLNTNAFEAPCRS-----GGHETLLRGLFPLTAIMNHECTPNASHYFENGRLAVVRAARDIPKGG 280
            .....:.:..|.|     |..:.:..||:|..:::||.|.||....|| |...::|..::||||.
 Frog   192 YFGKVSAKVTCNSFTISDGEMQDVGVGLYPSMSLLNHSCDPNCVIVFE-GTCLLLRTVKEIPKGE 255

  Fly   281 EITTTYTKILWGNLTRNIFLKMTKHFACDCVRC--HDNTEN 319
            |:|.:|..:......|...|:....|.|||.||  .|..|:
 Frog   256 ELTISYIDVKMPTQGRRDQLQRQYCFLCDCQRCLLRDKDED 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-8NP_001014717.1 SET <189..293 CDD:214614 29/111 (26%)
smyd3XP_031758360.1 SET_SMYD3 24..289 CDD:380980 66/292 (23%)
zf-MYND 67..105 CDD:396356 8/48 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D981799at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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