DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mct1 and MCH4

DIOPT Version :9

Sequence 1:NP_001284810.1 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_014522.1 Gene:MCH4 / 854030 SGDID:S000005479 Length:501 Species:Saccharomyces cerevisiae


Alignment Length:550 Identity:97/550 - (17%)
Similarity:176/550 - (32%) Gaps:187/550 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PDGGW-GWVVVFGSFMIHIVTDGMTYSFGIF--YNEFLDYFNEGKGYTAWIASIMVGVTFSSGPI 90
            ||||. .|:||||:||..:...|:..|.|..  |.......|......:||.|:.:.::|.|..:
Yeast    90 PDGGLKAWLVVFGAFMGLVPVFGLINSLGAIESYISKHQLANISSSTISWIFSLYLAISFLSCIL 154

  Fly    91 SSSFVNRYGCRAVTIAGSILAASCIIVSMFAQNVLTLIITIGFGTGLGFGLIYLPAIVSVTQYFE 155
            |..:.:|.|...:...|:::.|..:......::|...|:.....:|||.|::..|.|.:|..:|.
Yeast   155 SGGYFDRNGSIGLMCTGTVIYAGGLFALANCKSVWQFILAFSVCSGLGTGILMTPLIGTVATWFL 219

  Fly   156 AKRSLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLIIGGIVLNCIIFGAMFRPLELEAPPQ 220
            .:|.:||.|:..|...|..||..:...|....|::.|:.|:..|.|.|:|.              
Yeast   220 KRRGIATSISTMGGSIGGIVFPIMLRKLYKEVGFQWAIRILSFICLTCLIC-------------- 270

  Fly   221 TPPNTPSTPKLAKKSAIIDQNTTAAELEPLKVLPKDQYLQLPQRTDTAVSGGALCRSNSVGHNLK 285
                          ::::.:..|...::|.|                                  
Yeast   271 --------------ASVLARERTKPVVQPFK---------------------------------- 287

  Fly   286 PNLNNNSNGAVNGQGPTLVTPPQAVVKSTSNDDIARKCHSQLQLTPLRDAHRERSASGTMYRPDA 350
                                         |..::|:.                            
Yeast   288 -----------------------------SKAEVAKW---------------------------- 295

  Fly   351 LYQGSLHNLPDYVSSRNDLSRSMSGSGVIKRYGSLRQSNNVSQSQEEAKCCGCITCSKETRDTFA 415
                       |:||..:....:.|..:....|:         |..|:....|.|          
Yeast   296 -----------YISSVFNWRYFLEGKFLFVAIGA---------SFAESSLTSCAT---------- 330

  Fly   416 EMMNFSLLKDMVFVIFSVSNFCTSIGFNVPYLYVVAYAETLKLTKTDASYLISTIGVANTVGRII 480
                                            |:.:|:.|...|:..|..:|:.......:||.|
Yeast   331 --------------------------------YLASYSMTRGNTENVAYTMITASNAVGILGRYI 363

  Fly   481 LGYISDKPWVNRLLVYNVCLTACGVSTAM--VPLCHDFQSLAFYCCVFGFTIGAYVGLTSVILVD 543
            .||.:|| ::.|..|..:.::...:...:  :|...:.:.|..|.|::||:.|:.:.||.|.:..
Yeast   364 PGYFADK-FIGRFNVEIITISMAALFNFVMWLPFGGNTKVLWAYVCLWGFSTGSILSLTPVCIGQ 427

  Fly   544 LLGLDKLTNAFGLLLLFQGIASFIGPPIGG 573
            :.........:..:.|.|.:.:....||||
Yeast   428 ISKTTDFGKRYATVYLLQALVTIPVLPIGG 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mct1NP_001284810.1 MFS 35..>213 CDD:119392 48/179 (27%)
MFS <426..604 CDD:119392 30/149 (20%)
MCH4NP_014522.1 MFS_MCT_SLC16 96..490 CDD:340910 92/543 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343230
Domainoid 1 1.000 72 1.000 Domainoid score I2205
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.840

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