DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mct1 and AT2G28120

DIOPT Version :10

Sequence 1:NP_477334.2 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_180379.1 Gene:AT2G28120 / 817358 AraportID:AT2G28120 Length:577 Species:Arabidopsis thaliana


Alignment Length:597 Identity:112/597 - (18%)
Similarity:194/597 - (32%) Gaps:179/597 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 WVVVFGSFMIHIVTDGMTYSFGIF---------YNE----FLDYF-----NEG--KGYTAWIASI 79
            |.:||.||:| :...|.||.||.:         |::    .|.:|     |.|  .|..|.:...
plant    18 WFMVFASFLI-MACAGATYLFGTYSKDIKSTLGYDQTTLNLLGFFKDLGANVGVLSGLIAEVTPT 81

  Fly    80 MVGVTFSSGPISSSFVNRYGCRAVTIAGSILAAS----CIIVSMFA--QNVLTLIITIGFGTGLG 138
            ...:|..|   :.:||. |....:|:.|.:....    |:.:.:.|  ||..        .||  
plant    82 WFVLTIGS---AMNFVG-YFMIWLTVTGKVAKPKVWQMCLYICIGANSQNFA--------NTG-- 132

  Fly   139 FGLIYLPAIVSVTQYFEAKRSLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLIIGGI-VLN 202
                   |:|:..:.|...|.:..|:.....|....:|..| .|.|..:..:..:|:|..: ...
plant   133 -------ALVTCVKNFPESRGVMLGLLKGYVGLSGAIFTQL-YFAIYGHDSKSLILLIAWLPAAV 189

  Fly   203 CIIFGAMFRPLELEAPPQTPPNTPSTPKLAKKSAIIDQNTTAAELEPLKVLPKDQYLQLPQRTDT 267
            .::|..:.|                     :|..:..:|       .|.|..:..|:.:      
plant   190 SLVFVYLIR---------------------EKKVVRQRN-------ELSVFYQFLYISI------ 220

  Fly   268 AVSGGALCRSNSVGHNLKPNLNNNSNGAVNGQGPTLVTPPQAVVKSTSNDDIARKCHSQLQLTPL 332
                                                                    ...|.|..:
plant   221 --------------------------------------------------------FLALFLMAM 229

  Fly   333 RDAHRERSASGTMYRPDALYQGSLHNLPDYVSSRNDLS---------RSMSGSGVIKRYGSL--- 385
            ..|.::...|...|...|....:|..:|..||.:.:|.         ...|...|.|....|   
plant   230 NIAEKQVHFSKAAYAASATICCALLFVPLTVSVKQELEVWNMMKLPIEEPSEVKVEKPKKELDLD 294

  Fly   386 -RQSNNVSQSQEEAKCCGCITCSKETRDTFAEMMNFSLLKDMVFVIFSVSNFCTSIGFNVPYL-Y 448
             .::..|:..::|.|.|.....|...|.....::...|..||  :|..|:.|| .:|.::..: .
plant   295 QDKAAKVNGEEKETKSCFSTVFSPPPRGEDYTILQALLSTDM--IILFVATFC-GLGSSLTAVDN 356

  Fly   449 VVAYAETLKLTKTDASYLISTIGVANTVGRIILGYISD---------KPWVNRLLVYNVCLTACG 504
            :....|:|.......|..:|.:.:.|..||:..|::|:         :|    |::..|.|.:|.
plant   357 LGQIGESLGYPNHTVSSFVSLVSIWNYFGRVFSGFVSEYLLAKYKLPRP----LMMTLVLLLSCA 417

  Fly   505 ---VSTAMVPLCHDFQSLAFYCCVFGFTIGAYVGLTSVILVDLLGLDKLTNAFGLLLLFQGIASF 566
               :....||     .|:.....:.||:.||.:.|...|:.:|.||...:..|....|...:.|:
plant   418 GHLLIAFPVP-----GSVYIASILMGFSFGAQLPLLFAIISELFGLKYYSTLFNCGQLASPLGSY 477

  Fly   567 I-GPPIGGWMYD 577
            | ...:.|.:||
plant   478 ILNVRVTGMLYD 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mct1NP_477334.2 MFS_MCT_SLC16 34..604 CDD:340910 112/597 (19%)
AT2G28120NP_180379.1 Nodulin-like 17..262 CDD:284279 59/356 (17%)
UhpC <336..544 CDD:441872 39/166 (23%)

Return to query results.
Submit another query.