DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mct1 and Slc16a3

DIOPT Version :9

Sequence 1:NP_001284810.1 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_110461.1 Gene:Slc16a3 / 80878 RGDID:620603 Length:471 Species:Rattus norvegicus


Alignment Length:616 Identity:147/616 - (23%)
Similarity:246/616 - (39%) Gaps:217/616 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 MERQPT---PPDGGWGWVVVFGSFMIHIVTDGMTYSF----GIFYNEFLDYFNEGKGYTAWIASI 79
            ::..||   .|||||||.|:||.|:|    .|.:|:|    .:|:.|.:..|..|...||||:||
  Rat     6 VDEGPTGIKAPDGGWGWAVLFGCFII----TGFSYAFPKAVSVFFKELMHEFGIGYSDTAWISSI 66

  Fly    80 MVGVTFSSGPISSSFVNRYGCRAVTIAGSILAASCIIVSMFAQNVLTLIITIGFGTGLGFGLIYL 144
            ::.:.:.:||:.|..|||:|||.|.:.|.:.|:..::.:.|.::::.:.:|.|..||||..|.:.
  Rat    67 LLAMLYGTGPLCSMCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIQIYLTTGVITGLGLALNFQ 131

  Fly   145 PAIVSVTQYFEAKRSLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLIIGGIVLNCIIFGAM 209
            |:::.:.:||..:|.:|.|:|..||.......:||.:.|..:|||||..||:||::|||.:..|:
  Rat   132 PSLIMLNRYFNKRRPMANGLAAAGSPVFLCALSPLGQLLQDHYGWRGGFLILGGLLLNCCVCAAL 196

  Fly   210 FRPLELEAPPQTPPNTPSTPKLAKKSAIIDQNTTAAELEPLKVLPKDQYLQLPQRTDTAVSGGAL 274
            .|||                                      |.|:             .|||| 
  Rat   197 MRPL--------------------------------------VAPQ-------------ASGGA- 209

  Fly   275 CRSNSVGHNLKPNLNNNSNGAVNGQGPTLVTPPQAVVKSTSNDDIARKCHSQLQLTPLRDAHRER 339
                      :|:            ||...:|                                 
  Rat   210 ----------EPH------------GPQRPSP--------------------------------- 219

  Fly   340 SASGTMYRPDALYQGSLHNLPDYVSSRNDLSRSMSGSGVIKRYGSLRQSNNVSQSQEEAKCCGCI 404
                                                                             
  Rat   220 ----------------------------------------------------------------- 219

  Fly   405 TCSKETRDTFAEMMNFSLLKDMVFVIFSVSNFCTSIGFNVPYLYVVAYAETLKLTKTDASYLIST 469
                       .:::.|:.:|..|:|::|:.....:|..||.::||:||:.:.:..|.|::|::.
  Rat   220 -----------RLLDLSVFRDRGFLIYAVAASIMVLGLFVPPVFVVSYAKDMGVPDTKAAFLLTI 273

  Fly   470 IGVANTVGRIILGYISDKPWVNRLLVYNVCLTACGV----------STAMVPLCHDFQSLAFYCC 524
            :|..:...|...|:|:.   :.::..|:|.|.:..:          |||     .|:..|..:|.
  Rat   274 LGFIDIFARPTAGFITG---LKKVRPYSVYLFSFAMFFNGFTDLTGSTA-----SDYGGLVVFCI 330

  Fly   525 VFGFTIGAYVGLTSVILVDLLGLDKLTNAFGLLLLFQGIASFIGPPIGGWMYDLTDSYAPAFLMA 589
            .||.:.|....|...:|:.::|..|.::|.||:||.:.:|..||||.||.:.|.|..|...|::|
  Rat   331 FFGISYGMVGALQFEVLMAIVGTQKFSSAIGLVLLLEAVAVLIGPPSGGKLLDATKVYKYVFILA 395

  Fly   590 GLMIAISGLVM-----FAIPPLQRLQVRKSE 615
            |..:..|.||:     |.|...:|.:|.|.|
  Rat   396 GAEVLTSSLVLLLGNFFCIGKRKRPEVTKPE 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mct1NP_001284810.1 MFS 35..>213 CDD:119392 65/181 (36%)
MFS <426..604 CDD:119392 55/192 (29%)
Slc16a3NP_110461.1 MFS_MCT3_4 21..410 CDD:340988 134/583 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339260
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm12325
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.750

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