DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mct1 and Slc16a9

DIOPT Version :9

Sequence 1:NP_001284810.1 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster
Sequence 2:XP_038955085.1 Gene:Slc16a9 / 687808 RGDID:1596295 Length:508 Species:Rattus norvegicus


Alignment Length:598 Identity:171/598 - (28%)
Similarity:257/598 - (42%) Gaps:130/598 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PDGGWGWVVVFGSFMIHIVTDGMTYSFGIFYNEFLDYFNEGKGYTAWIASIMVGVTFSSGPISSS 93
            ||||||||:|..||....:..|...:.|:.|.|:||.|.||||.|||:.|:..||...:.|:.|.
  Rat     7 PDGGWGWVIVVVSFFTQFLCYGSPLAVGVLYVEWLDAFGEGKGKTAWVGSLASGVGLLASPVCSL 71

  Fly    94 FVNRYGCRAVTIAGSILAASCIIVSMFAQNVLTLIITIGFGTGLGFGLIYLPAIVSVTQYFEAKR 158
            ||:.:|.|.|||....|.|..:::|..|.|:..|..:.|...|||.||:|...:....|||:::|
  Rat    72 FVSSFGARPVTIFSGFLVAGGLMLSSLAPNIYFLFFSYGIVVGLGCGLLYTATVTITCQYFDSRR 136

  Fly   159 SLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLIIGGIVLNCIIFGAMFRPLELEAPPQTPP 223
            .||.|:...||..|.|::|.|...||..||..|.:||:|.:.||.:..|::.|||:....|    
  Rat   137 GLALGLISTGSSVGLFIYAALQRMLIEFYGLDGCLLIVGALALNILACGSLMRPLQTSDCP---- 197

  Fly   224 NTPSTPKLAKKSAIIDQNTTAAELEPLKVLPKDQYLQLPQRTDTAVSGGALCRSNSVGHNLKPNL 288
                                    .|.|:.|::    :|.|                 :::....
  Rat   198 ------------------------FPEKIAPEN----VPDR-----------------YSIYNEK 217

  Fly   289 NNNSNGAVNGQGPTLVTPPQAVVKSTSNDDIARKCHSQLQLTPLRDAHRERSASGTMYRPDALYQ 353
            ..|....:..|.           |..||:|   ||      .|..|..||.|             
  Rat   218 EKNQEETMTFQD-----------KGYSNED---KC------LPNGDWGRETS------------- 249

  Fly   354 GSLHNLPDYVSSRNDLSRSMSGSGVIK-----RYGSLRQSNNVSQS-----QEEAKCCGCITCSK 408
                           |.::.:|:...|     :...:.|:|...|.     |.....||      
  Rat   250 ---------------LPKNPTGAAHTKEPEPYKKKVVEQTNFCKQLAKRKWQVYRNYCG------ 293

  Fly   409 ETRDTFAEMMNFSLLKDMVFVIFSVSNFCTSIGFNVPYLYVVAYAETLKLTKTDASY-LISTIGV 472
            ||.         ||.|:.||....|:.....||...|.|.:...|.:..:.:.|.:. |||..|:
  Rat   294 ETA---------SLFKNKVFSALFVAILLFDIGGFPPSLLMEDVARSYHVREEDLTIPLISIFGI 349

  Fly   473 ANTVGRIILGYISDKPWVNRLLVYNVCLTACGVSTAMVPLCHDFQSLAFYCCVFGFTIGAYVGLT 537
            ...||:::||.::|..|||.|.:|...|...|::...:||...:.:||....:.||..|.: .:.
  Rat   350 MTAVGKLLLGILADFKWVNTLYLYVATLIITGLALCAIPLAKSYVTLAILSGILGFLTGNW-SIF 413

  Fly   538 SVILVDLLGLDKLTNAFGLLLLFQGIASFIGPPIGGWMYDLTDSYAPAFLMAGLMIAISG-LVMF 601
            ..:....:|:|||.:|:|:|:.|.|:.:.:||||.||.||.|.:|..||..:|..:.:.| :::.
  Rat   414 PYVTTKTVGIDKLAHAYGILMFFAGLGNSLGPPIVGWFYDWTQTYDIAFYFSGFCVLLGGFILLL 478

  Fly   602 AIPPL-----QRL 609
            ||.|.     |||
  Rat   479 AILPCWGMCNQRL 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mct1NP_001284810.1 MFS 35..>213 CDD:119392 69/177 (39%)
MFS <426..604 CDD:119392 56/179 (31%)
Slc16a9XP_038955085.1 MFS_MCT9 12..479 CDD:340986 160/579 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 103 1.000 Domainoid score I6612
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D352338at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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