DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mct1 and slc16a7

DIOPT Version :10

Sequence 1:NP_477334.2 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_001032485.2 Gene:slc16a7 / 641419 ZFINID:ZDB-GENE-051113-248 Length:465 Species:Danio rerio


Alignment Length:607 Identity:141/607 - (23%)
Similarity:238/607 - (39%) Gaps:184/607 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 TPPDGGWGWVVVFGSFMIHIVTDGMTYSF----GIFYNEFLDYFNEGKGYTAWIASIMVGVTFSS 87
            |||||||||.||||||    ::.|.:|:|    .|::.|..:||:......||::|||:...::.
Zfish    12 TPPDGGWGWAVVFGSF----ISIGFSYAFPKSLTIYFKEIQEYFSISYSQIAWVSSIMLATMYAG 72

  Fly    88 GPISSSFVNRYGCRAVTIAGSILAASCIIVSMFAQNVLTLIITIGF--GTGLGFGLIYLPAIVSV 150
            ||:||..|||||.|.|.|||.::....::.:.|..::|.|.:.:|.  |.||.|.|  .||:..:
Zfish    73 GPVSSILVNRYGSRPVVIAGGLMVGVAMVTASFGTSILHLYLCVGVIGGFGLAFNL--QPALTII 135

  Fly   151 TQYFEAKRSLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLIIGGIVLNCIIFGAMFRPLEL 215
            .:||..||.:|.|||:.||.......||:.:||...:||||:..|:||::.||.:.|::.||:::
Zfish   136 GKYFLVKRPMANGIAMAGSPVFLSTLAPVNQFLFDQFGWRGSFFILGGVLFNCCVAGSLMRPIKI 200

  Fly   216 EAPPQTPPNTPSTPKLAKKSAIIDQNTTAAELEPLKVLPKDQYLQLPQRTDTAVSGGALCRSNSV 280
            .                                                                
Zfish   201 P---------------------------------------------------------------- 201

  Fly   281 GHNLKPNLNNNSNGAVNGQGPTLVTPPQAVVKSTSNDDIARKCHSQLQLTPLRDAHRERSASGTM 345
                                          |..|:.|:|:.:                       
Zfish   202 ------------------------------VSKTTEDNISPQ----------------------- 213

  Fly   346 YRPDALYQGSLHNLPDYVSSRNDLSRSMSGSGVIKRYGSLRQSNNVSQSQEEAKCCGCITCSKET 410
                                                          :..|:|:|..||  .||  
Zfish   214 ----------------------------------------------TAGQDESKPSGC--SSK-- 228

  Fly   411 RDTFAEMMNFSLLKDMVFVIFSVSNFCTSIGFNVPYLYVVAYAETLKLTKTDASYLISTIGVANT 475
               ..:.::.||.|...|:|:.|.|.....||..|.:::..||:...:.:..|::|:|...:.:.
Zfish   229 ---LNQFIDISLFKHRGFLIYLVGNVLMFFGFFAPVVFLAPYAKHQGVDEYSAAFLLSIFALVDM 290

  Fly   476 VGRIILGYISDKPWVNRLLVY--NVCLTACGVSTAMVPLCHDFQSLAFYCCVFGFTIGAYVGLTS 538
            ..|...|.:::..|:...:.|  :..:|..|:...|.||...:..|..|..:||...|....|..
Zfish   291 FARPGTGLVANTKWIRPKIQYFFSFAVTYNGLCHLMCPLLPGYIDLVVYAVLFGLAFGMVCALLF 355

  Fly   539 VILVDLLGLDKLTNAFGLLLLFQGIASFIGPPIGGWMYDLTDSYAPAFLMAGLMIAISGLVMFAI 603
            .:|:||:|..:.::|.||..:.:.....:||||.|.:.|:...|...:...|:|:...|:.:|.:
Zfish   356 EVLMDLVGAQRFSSAVGLATIIECGPVLLGPPISGLLVDIFMDYKYMYFACGMMMLAGGVFLFIM 420

  Fly   604 PPLQRLQVRKSERKPHTEHLAL 625
            .......::|.|::.:.|.|.:
Zfish   421 NYYNYRWLKKEEKQRNAEELQI 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mct1NP_477334.2 MFS_MCT_SLC16 34..604 CDD:340910 130/577 (23%)
slc16a7NP_001032485.2 2A0113 1..440 CDD:273325 140/603 (23%)

Return to query results.
Submit another query.