DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mct1 and slc16a4

DIOPT Version :9

Sequence 1:NP_001284810.1 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_001074068.2 Gene:slc16a4 / 567144 ZFINID:ZDB-GENE-070112-602 Length:558 Species:Danio rerio


Alignment Length:605 Identity:173/605 - (28%)
Similarity:274/605 - (45%) Gaps:103/605 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 PPDGGWGWVVVFGSFMIHIVTDGMTYSFGIFYNEFLDYFNEGKGYTAWIASIMVGVTFSSGPISS 92
            ||||||||:||...|:::::..|...:||||:....|.|.......:||.|||..:..|.||::|
Zfish    37 PPDGGWGWMVVLHCFLVNVLVMGTLKTFGIFFVALQDEFGGSSESISWIGSIMSSLRLSGGPLAS 101

  Fly    93 SFVNRYGCRAVTIAGSILAASCIIVSMFAQNVLTLIITIGFGTGLGFGLIYLPAIVSVTQYFEAK 157
            ....:.|.|..:|.|::..::..:.|:||.:|..|.|::|...||||.|:|....|.:..||  :
Zfish   102 VACAKLGNRVTSIVGALFVSAGFLFSIFATSVTYLYISMGLVVGLGFALLYQATSVVIVTYF--R 164

  Fly   158 RSLATGIAVCGSGFG-TFVFAPLTEFLIGNYGWRGAMLIIGGIVLNCIIFGAMFRPLELEAPPQT 221
            :.|||..::..||.| ||..||.|:.|:..|.|:||:||:||::||.:..|.:.||:.:..|   
Zfish   165 KRLATAYSIGRSGMGLTFALAPFTQLLLDQYAWQGALLILGGLMLNLVASGMLLRPINIRHP--- 226

  Fly   222 PPNTPSTPKLAKKSAIIDQNTTAAELEPLKVLPKDQYLQLPQRTDTAVSGGALCRSNSVGHNLKP 286
                        .|.|.:......|.:|||                                   
Zfish   227 ------------ASPISNSTIHKTEKDPLK----------------------------------- 244

  Fly   287 NLNNNSNG---AVNGQGPTLVTPPQAVVKSTSNDDIARKCHSQLQLTPLRDAHR--ERSASGTMY 346
               ||.||   ..||...:..:||  :.|.|.  .|....|.|..| |..|..:  :...:||  
Zfish   245 ---NNMNGNTPVANGTSKSDSSPP--IHKDTL--IIKNPVHEQNSL-PHLDLKKPTQNGVNGT-- 299

  Fly   347 RPDALYQGSLHNLPDYVSSRNDLSRSMSGSGVIKRYGSLRQSNNVSQSQEEAKCCGCITCSKETR 411
                            .||:...|..|:|   :....||.::.......|.:             
Zfish   300 ----------------DSSQTKTSPEMNG---VSPVDSLLENGRTENVPENS------------- 332

  Fly   412 DTFAEMMNFSLLKDMVFVIFSVSNFCTSIGFNVPYLYVVAYAETLKLTKTDASYLISTIGVANTV 476
               .::::|||||:..|.|::.|...:.:.:.:||.::.|.|..|.:...|||::||..|:..||
Zfish   333 ---PKVLDFSLLKNPFFCIYTWSLVFSQLAYFIPYFHLSARARNLGIDPMDASFIISVAGITETV 394

  Fly   477 GRIILGYISDKPWVNRLLVYNVCLTACGVSTAMVPLCHDFQSLAFYCCVFGFTIGAYVGLTSVIL 541
            .::..|:::|:..|::...:...|..|||...:.||...:..|..|...|....|.|:.|...:|
Zfish   395 AQLASGWVTDRNLVHKYHYHKAYLILCGVVNLLSPLATSYILLMVYAVFFAIFCGGYMALLLPVL 459

  Fly   542 VDLLGLDKLTNAFGLLLLFQGIASFIGPPIGGWMYDLTDSYAPAFLMAGLMIAISGLVMFAIPPL 606
            |||:|.|||.|:.|..:.|.|:....|||:.|::||.|.:|..:|.:||:...:|.:.:|..|..
Zfish   460 VDLVGADKLNNSMGFSMFFVGLGCLTGPPLAGFLYDYTQTYDCSFYLAGVCYLLSSISLFLEPLA 524

  Fly   607 QRLQVRKSERKPHTEHLALS 626
            :|.|.||...:...:.|..|
Zfish   525 RRWQARKERLETLNQELMWS 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mct1NP_001284810.1 MFS 35..>213 CDD:119392 64/178 (36%)
MFS <426..604 CDD:119392 56/177 (32%)
slc16a4NP_001074068.2 2A0113 35..520 CDD:273325 165/579 (28%)
MFS 47..520 CDD:119392 156/569 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578916
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 290 1.000 Inparanoid score I2778
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D352338at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_109218
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.900

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