DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mct1 and slc16a6a

DIOPT Version :9

Sequence 1:NP_001284810.1 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_001243761.1 Gene:slc16a6a / 564872 ZFINID:ZDB-GENE-110208-1 Length:495 Species:Danio rerio


Alignment Length:582 Identity:133/582 - (22%)
Similarity:240/582 - (41%) Gaps:142/582 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PDGGWGWVVVFGSFMIHIVTDGMTYSFGIFYNEFLDYFNEGKGYTAWIASIMVGVTFSSGPISSS 93
            |||||||:|....|::.:.|.|:..|||||..:.:..|||.....:||.||.|.|...:.|:|:.
Zfish    21 PDGGWGWIVAVALFLVEVFTYGVIKSFGIFLKDLMSDFNETNSRVSWIISICVFVMTFTAPLSTM 85

  Fly    94 FVNRYGCRAVTIAGSILAASCIIVSMFAQNVLTLIITIGFGTGLGFGLIYLPAIVSVTQYFEAKR 158
            ..||:|.:.|.:.|..|.:...|.:.|..::..:.:|||..||||:.|.:||....::|||..:|
Zfish    86 LSNRFGFQPVVMFGGFLISLGTISTAFTSSINQMYLTIGIATGLGYCLTFLPTATILSQYFSRRR 150

  Fly   159 SLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLIIGGIVLNCIIFGAMFRPLELEAPPQTPP 223
            |:...:|..|..|.||.|||....|....|.|..:::||.:....||.||:.||:.::       
Zfish   151 SVVMAMASTGESFATFAFAPAFTALKNYIGRRYTLVVIGTLQGITIICGALLRPIVIK------- 208

  Fly   224 NTPSTPKLAKKSAIIDQNTTAAELEPLKVLPKDQYLQLPQRTDTAVSGGALCRSNSVGHNLKPNL 288
              |:             :.|..|.:....||.:|                               
Zfish   209 --PT-------------SLTETEQKITYTLPVEQ------------------------------- 227

  Fly   289 NNNSNGAVNGQGPTLVTPPQAVVKSTSNDDIARKCHSQLQLTPLRDAHRERSASGTMYRPDALYQ 353
                   |.|.|             :|.|.:.:....:                          |
Zfish   228 -------VQGFG-------------SSGDSVVQSLEQE--------------------------Q 246

  Fly   354 GSLHNLPDYVSSRNDLSRSMSGSGVIKRYGSLRQSNNVSQSQEEAKCCGCITCSKETRDTFAEMM 418
            |              |...:....|.....:|:|.:|.|:::                     ::
Zfish   247 G--------------LKSGIELEEVEPVQINLKQQDNTSKNR---------------------LL 276

  Fly   419 NFSLLKDMVFVIFSVSNFCTSIGFNVPYLYVVAYAETLKLTKTDASYLISTIGVANTVGRIILGY 483
            :.::||:..|:.:|......::||..|.||||..:.:|...:..|:|::|.:.::..:||:.:|:
Zfish   277 DLTVLKEGSFLCYSAFGLFATLGFFAPQLYVVELSASLGTERDKAAYMLSIMAISEIIGRLSIGW 341

  Fly   484 ISDKPWVNRLLVYNVCLTACGVSTAMVPLCHDFQSLAFYCCVFGFTIGAYVGLTSVILV-----D 543
            :.:...:.::.|..:|::...:...:..:.:.|..|...|.::||.:|   .:||..:.     |
Zfish   342 VMNCGCIRKIFVLLICVSLMCLVLVLFTIVNGFWGLVVCCVLYGFLLG---NITSTHIPMLAEDD 403

  Fly   544 LLGLDKLTNAFGLLLLFQGIASFIGPPIGGWMYDLTDSYAPAFLMAGLMIAISGLVMFAIPP 605
            ::|:.::..|.|:.:..|..|...|||:||.:.|:|.:|:.||......:.:..:.:..:.|
Zfish   404 VVGIQRMPLAVGVYVCIQSFAGLAGPPLGGVLVDITQNYSAAFYSCAAGMGLGAIFLGLVRP 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mct1NP_001284810.1 MFS 35..>213 CDD:119392 62/177 (35%)
MFS <426..604 CDD:119392 42/182 (23%)
slc16a6aNP_001243761.1 MFS 31..464 CDD:119392 124/569 (22%)
MFS_1 33..429 CDD:284993 114/532 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578900
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm6360
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.950

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