DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mct1 and si:dkey-246g23.4

DIOPT Version :9

Sequence 1:NP_001284810.1 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster
Sequence 2:XP_005169996.1 Gene:si:dkey-246g23.4 / 559426 ZFINID:ZDB-GENE-050419-234 Length:457 Species:Danio rerio


Alignment Length:611 Identity:132/611 - (21%)
Similarity:236/611 - (38%) Gaps:189/611 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 MERQ-----PTPP--DGGWGWVVVFGSFMIHIVTDGMTYSFGIFYNEFLDYFNEGKGYTAWIASI 79
            |||:     |..|  |||:||.:|..:|::..:|.|:..|||:|:.|...||:.....::||.||
Zfish     1 MERKRGTAGPAGPPLDGGYGWFIVLSTFLVFGLTFGVIKSFGVFFVEIHHYFSTTATASSWITSI 65

  Fly    80 MVGVTFSSGPISSSFVNRYGCRAVTIAGSILAASCIIVSMFAQNVLTLIITIGFGTGLGFGLIYL 144
            .|.......|:.|:....:|.|.|.:||.:|::..:::..|||::|.|.||:||.||.|:.|.:.
Zfish    66 SVATVHIGAPVGSALSTYFGHRPVVMAGGLLSSVGMVLGSFAQDLLQLYITVGFLTGFGYALTWT 130

  Fly   145 PAIVSVTQYFEAKRSLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLIIGGIVLNCIIFGAM 209
            |.:..:..||:.:|.:|..::..|....||:..|..:.::..:.|||||||:|.:.||..:.||:
Zfish   131 PTVTMLGWYFDKRRPVANALSSTGECLLTFILTPSFQLMVDQFSWRGAMLILGALQLNLCVCGAL 195

  Fly   210 FRPLELEAPPQTPPNTPSTPKLAKKSAIIDQNTTAAELEPLKVLPKDQYLQLPQRTDTAVSGGAL 274
            .|||                                                             
Zfish   196 LRPL------------------------------------------------------------- 199

  Fly   275 CRSNSVGHNLKPNLNNNSNGAVNGQGPTLVTPPQAVVKSTSNDDIARKCHSQLQLTPLRDAHRER 339
                                                                             
Zfish   200 ----------------------------------------------------------------- 199

  Fly   340 SASGTMYRPDALYQGSLHNLPDYVSSRNDLSRSMSGSGVIKRYGSLRQSNNVSQSQEE-AKCCGC 403
                                     ||:|..:                 :::.:::.| :||...
Zfish   200 -------------------------SRHDYFK-----------------DSIEENEHELSKCSNN 222

  Fly   404 ITCSKETRDTFAEMMNFSLLKDMVFVIFSVSNFCTSIGFNVPYLYVVAYAETLKLTKTDASYLIS 468
            ...|...:......::::|:.:..|:::|:.....::||..|.|::|.||.:..:.:..|:.|:|
Zfish   223 RADSDPMKVKVIRYVDYTLIANSRFMVYSMFGIFAALGFFAPSLFLVPYARSQGVEEYQAASLMS 287

  Fly   469 TIGVANTVGRIILGYISDKPWVNRL--LVYNVCLTACGVSTAMVPLCHDFQSLAFYCCVFGFTIG 531
            ...|.:.:||:..|::::...|..:  |:..|.|  .|....:.||...|..||.:...:|...|
Zfish   288 ISAVLDLLGRVFFGWVANLRLVETVHQLIGTVVL--LGAVLLLCPLATTFTQLAVFSAGYGLVFG 350

  Fly   532 AYVGLTSVILVDLLGLDKLTNAFGLLLLFQGIASFIGPPIGGWMYDLTDSYAPAFLMAGLMIAIS 596
            |.|.:...:|.:::|:::|.:|.|..:|.:.....:|||:.|...|....|...|||||:.:.:|
Zfish   351 ATVAIHITVLAEVVGVERLGSALGFFMLIRSSGGLLGPPLAGIFIDKMSDYGAGFLMAGVALLVS 415

  Fly   597 GLVMFAIPPLQRLQVRKSERKPHTEH 622
            .|.:..:..:         .|..|||
Zfish   416 ALFLIVLHFM---------NKKETEH 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mct1NP_001284810.1 MFS 35..>213 CDD:119392 60/177 (34%)
MFS <426..604 CDD:119392 49/179 (27%)
si:dkey-246g23.4XP_005169996.1 2A0111 10..446 CDD:331689 129/602 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578890
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D352338at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm6360
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.950

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