DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mct1 and slc16a12a

DIOPT Version :10

Sequence 1:NP_477334.2 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster
Sequence 2:XP_009291327.2 Gene:slc16a12a / 557762 ZFINID:ZDB-GENE-080721-24 Length:617 Species:Danio rerio


Alignment Length:629 Identity:179/629 - (28%)
Similarity:304/629 - (48%) Gaps:73/629 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PAR--RKSQQQHEACE----------MDM-ERQP---TPPDGGWGWVVVFGSFMIHIVTDGMTYS 54
            ||.  :|.:|:.|..|          ::| |:.|   |.|||||||::|.|.|:..:.|..:|..
Zfish    27 PAETGQKRKQEAERSEGMKERMKRGRLEMCEKNPCLATAPDGGWGWMIVAGCFLTTVCTRAVTRC 91

  Fly    55 FGIFYNEFLDYFNEGKGYTAWIASIMVGVTFSSGPISSSFVNRYGCRAVTIAGSILAASCIIVSM 119
            ..||:.||..||:.....||||.|::...|....|:.|...||...|...:.|.:|:::.:::|.
Zfish    92 VSIFFVEFQLYFSRDYSATAWIHSLLDCTTMLCAPLGSYIGNRLSSRIAIMIGGLLSSTGLLLSS 156

  Fly   120 FAQNVLTLIITIGFGTGLGFGLIYLPAIVSVTQYFEAKRSLATGIAVCGSGFGTFVFAPLTEFLI 184
            .|.:|..|.:|:|..||:||.|.|.|||..|..||..:::||.|||:.|||.|||:.||..:.||
Zfish   157 LATSVEFLYLTLGVLTGVGFALSYTPAIAMVGSYFRQRKALAYGIAMSGSGIGTFILAPAVQLLI 221

  Fly   185 GNYGWRGAMLIIGGIVLNCIIFGAMFRPLELEAPPQTP---PNTPSTPKLAKKSAIID-----QN 241
            ..:.||||:||:.|:|.:....||:.|||:.:...|..   .|..:...|..|.|.::     :.
Zfish   222 EFFSWRGALLILAGLVSHLCFCGALMRPLQSQRGRQNKMDLENGKTVDLLNVKLAYVELRGSMEV 286

  Fly   242 TTAAELEPLKVLPKDQYLQLPQRTDTAVSGGALCRSNSVGHNLKPNLNNNSNGAVNGQGPTLVTP 306
            |.|...|..|..|.:..|:         :|.....::.:..:   :|:...|     .|..|...
Zfish   287 THAVVKEMEKKEPSENMLR---------NGKGWIEADDMKQS---HLDEEEN-----HGQDLSEN 334

  Fly   307 PQAVVKSTSNDDIARKCHSQLQLTPLRDAHRERSASGTMYRPDALYQGSLHNLPDYVSSRNDLSR 371
            |:.|.|.:..:.......:.:|            :||........||.:: ..|:..|..|:...
Zfish   335 PKTVNKWSEEEPRTISIPALVQ------------SSGLPLENLLKYQKNI-TFPESKSEGNNNQS 386

  Fly   372 SMSGSGVIKRYGSLRQSNNVSQSQEEAKCCGCITCSKETRDTFAEMMNFSLLKDMVFVIFSVSNF 436
            :::.|.|:|       :..:.:|:|..        ....|.|..:..:|.|:.|  |::..||..
Zfish   387 TVAKSKVVK-------AKLLKESKENV--------WSVLRKTVLKEYSFLLIPD--FLLLLVSFL 434

  Fly   437 CTSIGFNVPYLYVVAYAETLKLTKTDASYLISTIGVANTVGRIILGYISDKPWVN--RLLVYNVC 499
            ..:.|.:||::|:|.|:.:..::...|:.::|.:||:..:|.|..|:|:|:..:.  |::.|.:.
Zfish   435 FLAYGCSVPFVYLVPYSLSAGVSPQQAALVMSILGVSGIIGTITFGWIADRKCLRPYRVVSYMLA 499

  Fly   500 LTACGVSTAMVPLCHDFQSLAFYCCVFGFTIGAYVGLTSVILVDLLGLDKLTNAFGLLLLFQGIA 564
            :.:.|:|...:||...|..|..:..::|:..||||.|..|:..|.:...:||:|.|::.....|.
Zfish   500 VGSEGLSCLFLPLLSGFSLLVPFSLIYGYFDGAYVALIPVVTSDTVSSAQLTSALGVVYFLHAIP 564

  Fly   565 SFIGPPIGGWMYDLTDSYAPAFLMAGLMIAISGLVMFAIPPLQR 608
            ..|.||||||:.|.|.||...|:::|:.:..|.:::.|:..:.|
Zfish   565 YLISPPIGGWLVDQTGSYTATFILSGVSLICSAVILAAVKVIFR 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mct1NP_477334.2 MFS_MCT_SLC16 34..604 CDD:340910 163/579 (28%)
slc16a12aXP_009291327.2 None

Return to query results.
Submit another query.