DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mct1 and slc16a12b

DIOPT Version :9

Sequence 1:NP_001284810.1 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_001139286.1 Gene:slc16a12b / 449947 ZFINID:ZDB-GENE-050522-80 Length:488 Species:Danio rerio


Alignment Length:597 Identity:159/597 - (26%)
Similarity:255/597 - (42%) Gaps:168/597 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 PPDGGWGWVVVFGSFMIHIVTDGMTYSFGIFYNEFLDYFNEGKGYTAWIASIMVGVTFSSGPISS 92
            ||||||||::|.|.|::.:.|..:|....||:.||..:|.:....||||.|::...|....|:.|
Zfish    23 PPDGGWGWMIVAGCFVVTVCTRAVTRCISIFFVEFQMHFAKDYSGTAWIHSLVDCTTMLCAPLGS 87

  Fly    93 SFVNRYGCRAVTIAGSILAASCIIVSMFAQNVLTLIITIGFGTGLGFGLIYLPAIVSVTQYFEAK 157
            ...|:..||...|.|..||:..:::|.||.::..|..|:|..|||||.|.|.|||..|..||..:
Zfish    88 LIGNQLSCRIAVILGGFLASVGLVLSSFATSLEYLYATLGLLTGLGFALCYTPAIAMVGIYFCER 152

  Fly   158 RSLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLIIGGIVLNCIIFGAMFRPLELEAPPQTP 222
            ::||.|||:.|||.|||:.||:.:.||.:|.||||:||:||.|||..:.||:.||:.|:.....|
Zfish   153 KALAYGIAMSGSGIGTFILAPVVQLLIEHYSWRGALLILGGFVLNLCVCGALLRPIILKEEEACP 217

  Fly   223 PNTPSTPKLAKKSAIIDQNTTAAELEPLKVLPKDQYLQLPQRTDTAVSGGALCRSNSVGHNLKPN 287
                                          ||.|                     :..|:::|| 
Zfish   218 ------------------------------LPVD---------------------SECGYSVKP- 230

  Fly   288 LNNNSNGAVNGQGPTLVTPPQAVVKSTSNDDIARKCHSQLQLTPLRDAHRERSASGTMYRPDALY 352
                  ..:|| |||          .::..|..::|...:|                        
Zfish   231 ------PTLNG-GPT----------RSAASDAKQRCFQSMQ------------------------ 254

  Fly   353 QGSLHNLPDYVSSRNDLSRSMSGSGVIKRYGSLRQSNNVSQSQEEAKCCGCITCSKETRDTFAEM 417
                    :|                                                       
Zfish   255 --------EY------------------------------------------------------- 256

  Fly   418 MNFSLLKDMVFVIFSVSNFCTSIGFNVPYLYVVAYAETLKLTKTDASYLISTIGVANTVGRIILG 482
             :|.|:.|  |::.:.|....:.|.::|::|:|.||..:.:....|::|:|.:||.:.||.|..|
Zfish   257 -HFLLMPD--FLVLAGSFLLLASGCSLPFVYLVPYALDVGVGHQHAAFLMSILGVIDIVGNITFG 318

  Fly   483 YISDKPWVNRLLVYNVCLTAC----GVSTAMVPLCHDFQSLAFYCCVFGFTIGAYVGLTSVILVD 543
            :::|:..:.:  ..|:|....    |:....:||...|..|..:..::|:..||||.|..|:..|
Zfish   319 WLTDRRCLKK--YRNICYMFAVGMEGLCCLFIPLLRTFVWLVPFSVLYGYFDGAYVALIPVVTSD 381

  Fly   544 LLGLDKLTNAFGLLLLFQGIASFIGPPIGGWMYDLTDSYAPAFLMAGLMIAISGLVMFAIPPL-- 606
            ::|...|::|.|::.....:...:.||||||:.|.|.:|...|.::|..:..|.|::|::..:  
Zfish   382 VVGRQYLSSALGVVYFLHAVPYLVSPPIGGWLVDTTGTYTATFFLSGFALISSSLLLFSVAIIRY 446

  Fly   607 -QRLQVRKSERK 617
             ||.|.:.|..|
Zfish   447 CQRNQKKNSLSK 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mct1NP_001284810.1 MFS 35..>213 CDD:119392 75/177 (42%)
MFS <426..604 CDD:119392 51/181 (28%)
slc16a12bNP_001139286.1 MFS 33..430 CDD:119392 143/557 (26%)
MFS_1 37..407 CDD:284993 130/530 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578906
Domainoid 1 1.000 104 1.000 Domainoid score I6633
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H130007
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm6360
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2106
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.780

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