DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mct1 and slc16a9b

DIOPT Version :9

Sequence 1:NP_001284810.1 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_001003552.1 Gene:slc16a9b / 445158 ZFINID:ZDB-GENE-040801-69 Length:486 Species:Danio rerio


Alignment Length:580 Identity:156/580 - (26%)
Similarity:245/580 - (42%) Gaps:142/580 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PDGGWGWVVVFGSFMIHIVTDGMTYSFGIFYNEFLDYFNEGKGYTAWIASIMVGVTFSSGPISSS 93
            |||||||.:|..|||...:..|...|.|:.|.|:|:.|.:.||.|||:.|::.||...:.||.|:
Zfish    10 PDGGWGWAIVVASFMGQFLAYGSPQSVGVLYPEWLNTFQDSKGMTAWVGSLVSGVGLIASPICSA 74

  Fly    94 FVNRYGCRAVTIAGSILAASCIIVSMFAQNVLTLIITIGFGTGLGFGLIYLPAIVSVTQYFEAKR 158
            .|..:|.|.|||...::.:..:::|.||.||..||.:.|...|||.||:|...:....|||:.:|
Zfish    75 CVVNFGARPVTIFSGVMVSGGLMLSAFAPNVQFLIFSYGIVVGLGCGLVYAATVTITCQYFDKRR 139

  Fly   159 SLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLIIGGIVLNCIIFGAMFRPLELEAPPQTPP 223
            .||.||...|:..|.|::|......|..:|..|.:|:||...||.|....:.|||.|.|      
Zfish   140 GLALGIVTTGTSVGGFLYAAAQNEFIALFGLDGCLLLIGCFALNIIACAGLMRPLHLPA------ 198

  Fly   224 NTPSTPKLAKKSAIIDQNTTAAELEPLKVLPKDQYLQLPQRTDTAVSGGALCRSNSVGHNLKPNL 288
                        ..:.|....||.....||.|...::.|                          
Zfish   199 ------------YYLKQRAAMAEKAEENVLEKSPVVEDP-------------------------- 225

  Fly   289 NNNSNGAVNGQGPTLVTPPQAVVKSTSNDDIARKCHSQLQLTPLRDAHRERSASGTMYRPDALYQ 353
                           |...|::|..|.:               .:|.|.:|              
Zfish   226 ---------------VKKTQSIVLITGD---------------TKDTHEKR-------------- 246

  Fly   354 GSLHNLPDYVSSRNDLSRSMSGSGVIKRYGSLRQSNNVSQSQEEAKCCGCITCSKETRDTFAEMM 418
                .|.:||:    |.|.|                                  |:.:..::|.:
Zfish   247 ----KLLNYVT----LVRLM----------------------------------KKKQKQYSEYL 269

  Fly   419 NF--SLLKDMVFVIFSVSNFCTSIGFNVPYLYV--VAYAETLKLTKTDASYLISTIGVANTVGRI 479
            :.  .:|::.||:...||.|...:|...|.|::  :|.:|.| :|......|:|.:.:|..||::
Zfish   270 HSIGQVLQNRVFLATCVSLFAYCLGAYTPLLFLEDLAQSEGL-ITGISTIPLVSIMSIAAGVGKL 333

  Fly   480 ILGYISDKPWVNRLLVYNVCLTACGVSTAMVPLCHDFQSLAFYCCVFGFTIGAYVGLTSVI---L 541
            :||.:.|..|:|.:.:|.|.|...|::..::|:..::..|.....|.||    :.|..|||   .
Zfish   334 LLGVMMDVRWMNSIYLYAVTLLGTGMALLIIPVTKNYAGLQVISAVLGF----FSGNWSVIPYMT 394

  Fly   542 VDLLGLDKLTNAFGLLLLFQGIASFIGPPIGGWMYDLTDSYAPAFLMAGLMIAISGLVMF 601
            ..::|:|:||.|:|:|:.|.|.:..:|||:.||:||...||..||..:|..:.:.|..:|
Zfish   395 TKVVGMDRLTEAYGILMFFGGFSIMLGPPVAGWIYDWMHSYDLAFYFSGGFVLLGGAGLF 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mct1NP_001284810.1 MFS 35..>213 CDD:119392 65/177 (37%)
MFS <426..604 CDD:119392 58/181 (32%)
slc16a9bNP_001003552.1 2A0113 8..474 CDD:273325 156/580 (27%)
MFS 19..455 CDD:119392 149/571 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578866
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D352338at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.850

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