DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mct1 and slc16a1b

DIOPT Version :9

Sequence 1:NP_001284810.1 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_956379.1 Gene:slc16a1b / 368274 ZFINID:ZDB-GENE-030515-5 Length:461 Species:Danio rerio


Alignment Length:584 Identity:131/584 - (22%)
Similarity:221/584 - (37%) Gaps:190/584 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 TPPDGGWGWVVVFGSFMIHIVTDGMTYSF----GIFYNEFLDYFNEGKGYTAWIASIMVGVTFSS 87
            |||:|||||.||.|:|    ::.|.:|:|    .:|:.|....||......:||:|||:.|.::.
Zfish    12 TPPEGGWGWAVVVGAF----ISIGFSYAFPKSITVFFKEIEVIFNATSSQVSWISSIMLAVMYAG 72

  Fly    88 GPISSSFVNRYGCRAVTIAGSILAASCIIVSMFAQNVLTLIITIGFGTGLGFGLIYLPAIVSVTQ 152
            |||||..||::|.|.:.|||..|:.:.::.:.|...|..|...:|...|||......||:..:.:
Zfish    73 GPISSILVNKFGSRPIMIAGGCLSGTGLVAASFCDTVEGLYFCVGVIGGLGLAFNLNPALTMIGK 137

  Fly   153 YFEAKRSLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLIIGGIVLNCIIFGAMFRPLELEA 217
            ||..:|.:|.|||:.||.......|||..:|...:||||:.||:||.:|||.:.|::.||:    
Zfish   138 YFYKRRPIANGIAMAGSPVFLSTLAPLNSWLFDQFGWRGSFLILGGALLNCCVAGSLMRPI---- 198

  Fly   218 PPQTPPNTPSTPKLAKKSAIIDQNTTAAELEPLKVLPKDQYLQLPQRTDTAVSGGALCRSNSVGH 282
               .|...|:.||            ..||::|                                 
Zfish   199 ---GPKPQPAIPK------------EDAEIKP--------------------------------- 215

  Fly   283 NLKPNLNNNSNGAVNGQGPTLVTPPQAVVKSTSNDDIARKCHSQLQLTPLRDAHRERSASGTMYR 347
                                                                             
Zfish   216 ----------------------------------------------------------------- 215

  Fly   348 PDALYQGSLHNLPDYVSSRNDLSRSMSGSGVIKRYGSLRQSNNVSQSQEEAKCCGCITCSKETRD 412
                                                           ||:          |....
Zfish   216 -----------------------------------------------QEK----------KTVMQ 223

  Fly   413 TFAEMMNFSLLKDMVFVIFSVSNFCTSIGFNVPYLYVVAYAETLKLTKTDASYLISTIGVANTVG 477
            |....::.:|.....|:::.:.|.....|...|.:::..||::..::|..|::|:|.:...:.:.
Zfish   224 TINGFLDLTLFTHRGFLLYLLGNVIMFFGLFAPLVFLSNYAKSKHISKDKAAFLLSILAFTDMIA 288

  Fly   478 RIILGYISDKPWVNRLLVYNVCLTAC--GVSTAMVPLCHDFQSLAFYCCVFGFTIGAYVGLTSVI 540
            |..:|.:::..||...:.|....:..  ||...:.||..|:...|.|...||...|   .|:||:
Zfish   289 RPSMGLVANTRWVRPRIQYFFAASVLYNGVCHLLAPLSTDYLGFAIYAVFFGVAFG---WLSSVL 350

  Fly   541 ---LVDLLGLDKLTNAFGLLLLFQGIASFIGPPIGGWMYDLTDSYAPAFLMAGLMIAISGLVMF 601
               |:||:|..:.::|.||:.:.:.....:|||:.|.:.|:.|.|...:...|:::.|:.:.:|
Zfish   351 FETLMDLVGAQRFSSAVGLVTIVECAPVLLGPPLLGRLNDIYDDYKYTYQGCGIVLVIASIFLF 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mct1NP_001284810.1 MFS 35..>213 CDD:119392 66/181 (36%)
MFS <426..604 CDD:119392 45/181 (25%)
slc16a1bNP_956379.1 2A0113 1..442 CDD:273325 131/584 (22%)
MFS 20..415 CDD:119392 124/576 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578876
Domainoid 1 1.000 142 1.000 Domainoid score I4621
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm6360
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.850

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