DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mct1 and slc16a3b

DIOPT Version :9

Sequence 1:NP_001284810.1 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_997873.1 Gene:slc16a3b / 327276 ZFINID:ZDB-GENE-030131-5487 Length:508 Species:Danio rerio


Alignment Length:596 Identity:145/596 - (24%)
Similarity:240/596 - (40%) Gaps:195/596 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PDGGWGWVVVFGSFMIHIVTDGMTYSF----GIFYNEFLDYFNEGKGYTAWIASIMVGVTFSSGP 89
            |||||||.|:||.|:|    .|.:|:|    .:|:.|.:..|..|...||||:||::.:.:.:||
Zfish    16 PDGGWGWAVLFGCFII----TGFSYAFPKAVSVFFKELIREFGVGYSDTAWISSILLAMLYGTGP 76

  Fly    90 ISSSFVNRYGCRAVTIAGSILAASCIIVSMFAQNVLTLIITIGFGTGLGFGLIYLPAIVSVTQYF 154
            :.|..|||:|||.|.:.|.:.|:..::::.||.|::.:.:..|..||||..|.:.|:::.:.:||
Zfish    77 LCSILVNRFGCRPVMMVGGLFASLGMVLASFATNIIHIYLCTGVITGLGLALNFQPSLIMLNRYF 141

  Fly   155 EAKRSLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLIIGGIVLNCIIFGAMFRPLELEAPP 219
            ..||.||.|:|..||.......:||.:.|...|||||..||:||::|||...||:.|||      
Zfish   142 SEKRPLANGLAAAGSPVALCCLSPLGQVLQYKYGWRGGFLILGGLLLNCCACGALMRPL------ 200

  Fly   220 QTPPNTPSTPKLAKKSAIIDQNTTAAELEPLKVLPKDQYLQLPQRTDTAVSGGALCRSNSVGHNL 284
                       ||.|      .|:..|.:|.:..||                             
Zfish   201 -----------LAPK------KTSEVEEKPKETKPK----------------------------- 219

  Fly   285 KPNLNNNSNGAVNGQGPTLVTPPQAVVKSTSNDDIARKCHSQLQLTPLRDAHRERSASGTMYRPD 349
                                                                             
Zfish   220 ----------------------------------------------------------------- 219

  Fly   350 ALYQGSLHNLPDYVSSRNDLSRSMSGSGVIKRYGSLRQSNNVSQSQEEAKCCGCITCSKETRDTF 414
                                                                             
Zfish   220 ----------------------------------------------------------------- 219

  Fly   415 AEMMNFSLLKDMVFVIFSVSNFCTSIGFNVPYLYVVAYAETLKLTKTDASYLISTIGVANTVGRI 479
            .::::|::.||..|:|::::.....:|..||.::||:||:.|....|.::.|::.:|..:...|.
Zfish   220 PKLLDFTVFKDRGFLIYTIAASIMVLGLFVPPVFVVSYAKELGNEDTKSALLLTILGFIDIFARP 284

  Fly   480 ILGYISDKPWVNRLLVY--NVCLTACGVSTAMVPLCHDFQSLAFYCCVFGFTIGAYVGLTSVILV 542
            ..|.|:...||....||  :..:...|::..:.....|:.||..:|..||.:.|....|...:|:
Zfish   285 TSGIIAGLKWVRPRCVYLFSFAMIFNGIADILGSFAKDYASLVVFCIFFGISYGMVGALQFEVLM 349

  Fly   543 DLLGLDKLTNAFGLLLLFQGIASFIGPPIGGWMYDLTDSYAPAFLMAGLMIAISGLVMFAIPPLQ 607
            .::|.:|.::|.||:||.:.||..:|||..|.:.|.|.:|...|::||..:.:|.||: ||..| 
Zfish   350 AIVGTEKFSSAIGLVLLVEAIAVLVGPPGAGRLLDATKNYMYVFMLAGCEVVLSALVL-AICNL- 412

  Fly   608 RLQVRKSERKP 618
             |.:::..::|
Zfish   413 -LFIKRKPQQP 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mct1NP_001284810.1 MFS 35..>213 CDD:119392 69/181 (38%)
MFS <426..604 CDD:119392 53/179 (30%)
slc16a3bNP_997873.1 MFS 22..410 CDD:119392 135/574 (24%)
MFS_1 25..376 CDD:284993 119/536 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578912
Domainoid 1 1.000 142 1.000 Domainoid score I4621
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm6360
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.750

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