DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mct1 and Slc16a1

DIOPT Version :9

Sequence 1:NP_001284810.1 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_036848.1 Gene:Slc16a1 / 25027 RGDID:3690 Length:494 Species:Rattus norvegicus


Alignment Length:608 Identity:141/608 - (23%)
Similarity:230/608 - (37%) Gaps:181/608 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 TPPDGGWGWVVVFGSFMIHIVTDGMTYSF----GIFYNEFLDYFNEGKGYTAWIASIMVGVTFSS 87
            |||||||||.||.|:|    ::.|.:|:|    .:|:.|....|:......:||:|||:.|.::.
  Rat    12 TPPDGGWGWAVVVGAF----ISIGFSYAFPKSITVFFKEIEIIFSATTSEVSWISSIMLAVMYAG 72

  Fly    88 GPISSSFVNRYGCRAVTIAGSILAASCIIVSMFAQNVLTLIITIGFGTGLGFGLIYLPAIVSVTQ 152
            |||||..||:||.|.|.|||..|:...:|.:.|...|..|...||...|||......||:..:.:
  Rat    73 GPISSILVNKYGSRPVMIAGGCLSGCGLIAASFCNTVQELYFCIGVIGGLGLAFNLNPALTMIGK 137

  Fly   153 YFEAKRSLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLIIGGIVLNCIIFGAMFRPLELEA 217
            ||..||.||.|:|:.||.......|||.:...|.:||||:.||:||::|||.:.|::.||:    
  Rat   138 YFYKKRPLANGLAMAGSPVFLSTLAPLNQAFFGIFGWRGSFLILGGLLLNCCVAGSLMRPI---- 198

  Fly   218 PPQTPPNTPSTPKLAKKSAIIDQNTTAAELEPLKVLPKDQYLQLPQRTDTAVSGGALCRSNSVGH 282
                .|......||..|.::                                             
  Rat   199 ----GPQQGKVEKLKSKESL--------------------------------------------- 214

  Fly   283 NLKPNLNNNSNGAVNGQGPTLVTPPQAVVKSTSNDDIARKCHSQLQLTPLRDAHRERSASGTMYR 347
                                     |...||.:|.|:                            
  Rat   215 -------------------------QEAGKSDANTDL---------------------------- 226

  Fly   348 PDALYQGSLHNLPDYVSSRNDLSRSMSGSGVIKRYGSLRQSNNVSQSQEEAKCCGCITCSKETRD 412
                                              .|...:...:|..|                 
  Rat   227 ----------------------------------IGGSPKGEKLSVFQ----------------- 240

  Fly   413 TFAEMMNFSLLKDMVFVIFSVSNFCTSIGFNVPYLYVVAYAETLKLTKTDASYLISTIGVANTVG 477
            |..:.::.||.....|:::...|.....|...|.:::..|.::...:...:::|:|.:...:.|.
  Rat   241 TVNKFLDLSLFTHRGFLLYLSGNVVMFFGLFTPLVFLSNYGKSKHFSSEKSAFLLSILAFVDMVA 305

  Fly   478 RIILGYISDKPWVNRLLVY--NVCLTACGVSTAMVPLCHDFQSLAFYCCVFGFTIGAYVGLTSVI 540
            |..:|..::..|:...:.|  ...:.|.||...:.||...:.....|..||||..|   .|:||:
  Rat   306 RPSMGLAANTRWIRPRVQYFFAASVVANGVCHLLAPLSTTYVGFCIYAGVFGFAFG---WLSSVL 367

  Fly   541 ---LVDLLGLDKLTNAFGLLLLFQGIASFIGPPIGGWMYDLTDSYAPAFLMAGLMIAISGLVMF- 601
               |:||:|..:.::|.||:.:.:.....:|||:.|.:.|:...|...:...|:::.|:||.:| 
  Rat   368 FETLMDLVGPQRFSSAVGLVTIVECCPVLLGPPLLGRLNDMYGDYKYTYWACGVILIIAGLYLFI 432

  Fly   602 -------AIPPLQRLQVRKSERK 617
                   .:...|:.:.:|.:.|
  Rat   433 GMGINYRLVAKEQKAEEKKRDGK 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mct1NP_001284810.1 MFS 35..>213 CDD:119392 70/181 (39%)
MFS <426..604 CDD:119392 44/190 (23%)
Slc16a1NP_036848.1 2A0113 1..462 CDD:273325 141/608 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 446..494 2/10 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339238
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm12325
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.850

Return to query results.
Submit another query.