DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mct1 and Slc16a12

DIOPT Version :9

Sequence 1:NP_001284810.1 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_766426.1 Gene:Slc16a12 / 240638 MGIID:2147716 Length:486 Species:Mus musculus


Alignment Length:600 Identity:157/600 - (26%)
Similarity:258/600 - (43%) Gaps:168/600 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 TPPDGGWGWVVVFGSFMIHIVTDGMTYSFGIFYNEFLDYFNEGKGYTAWIASIMVGVTFSSGPIS 91
            :||||||||::|.|.|::.|.|..:|....||:.||..||.:....||||.||:..:|....|:.
Mouse    11 SPPDGGWGWMIVAGCFLVTICTRAVTRCISIFFVEFQTYFAQDYSQTAWIHSIVDCMTMLCAPLG 75

  Fly    92 SSFVNRYGCRAVTIAGSILAASCIIVSMFAQNVLTLIITIGFGTGLGFGLIYLPAIVSVTQYFEA 156
            |...|:..|:|..:.|.:||::..|:..||.::..|.:::|..|||||.|.|.|||..|.:||..
Mouse    76 SVVSNQLSCQAGIMLGGLLASTGFILGSFATSLKHLYLSLGVLTGLGFALCYSPAIAMVGKYFSR 140

  Fly   157 KRSLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLIIGGIVLNCIIFGAMFRPLELEAPPQT 221
            :::||.|||:.|||.|||:.||:.:.||..:.||||:||:||.|||..:.||:.||:.|      
Mouse   141 RKALAYGIAMSGSGIGTFILAPVVQLLIEQFSWRGALLILGGFVLNLCVCGALMRPITL------ 199

  Fly   222 PPNTPSTPKLAKKSAIIDQNTTAAELEPLKVLPKDQYLQLPQRTDTAVSGGALCRSNSVGHNLKP 286
                                                      :.|.:|                |
Mouse   200 ------------------------------------------KEDRSV----------------P 206

  Fly   287 NLNNNSNGAVNGQGPTLVTPPQAVVKSTSNDDIARKCHSQLQLTPLRDAHRERSASGTMYRPDAL 351
            ..|:|                                         |::.||.....:.|.|   
Mouse   207 EKNHN-----------------------------------------RESQREDCKQASPYSP--- 227

  Fly   352 YQGSLHNLPDYVSSRNDLSRSMSGSGVIKRYGSLRQSNNVSQSQEEAKCCGCITCSKETRDTFAE 416
                                                   :::...|.:.|    ||.:      :
Mouse   228 ---------------------------------------LTKECTETRLC----CSLQ------Q 243

  Fly   417 MMNFSLLKDMVFVIFSVSNFCTSIGFNVPYLYVVAYAETLKLTKTDASYLISTIGVANTVGRIIL 481
            ...|.|:.|  ||:.:||....:.|.:..::|:|.||.::.::...|::|:|.:||.:.||.|..
Mouse   244 EYGFLLMSD--FVVLAVSVLFMAYGCSPLFVYLVPYALSVGVSHHQAAFLMSILGVIDIVGNITF 306

  Fly   482 GYISDKPWVN--RLLVYNVCLTACGVSTAMVPLCHDFQSLAFYCCVFGFTIGAYVGLTSVILVDL 544
            |:::|:..:.  |.:.|...:...|:....:|:...|..|..:.|.||:..||||.|..|:..::
Mouse   307 GWLTDRRCLKNYRYVCYLFAVALDGLCYLCLPMLQTFPLLVPFSCTFGYFDGAYVTLIPVVTAEI 371

  Fly   545 LGLDKLTNAFGLLLLFQGIASFIGPPIGGWMYDLTDSYAPAFLMAGLMIAISGLVMFAIPPLQRL 609
            :|...|::|.|::.....:...:.|||.||:.|.|.||..|||:.|..:..|.:::..:..::|:
Mouse   372 VGTTSLSSALGVVYFLHAVPYLVSPPIAGWLVDTTGSYTAAFLLCGFAMIFSSILLGFVRIVKRM 436

  Fly   610 Q-------VRKSERK 617
            :       |:.|:.|
Mouse   437 KRTQVPFPVKDSDPK 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mct1NP_001284810.1 MFS 35..>213 CDD:119392 75/177 (42%)
MFS <426..604 CDD:119392 52/179 (29%)
Slc16a12NP_766426.1 MFS_MCT12 18..431 CDD:340982 147/571 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835631
Domainoid 1 1.000 145 1.000 Domainoid score I4552
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H130007
Inparanoid 1 1.050 285 1.000 Inparanoid score I2828
Isobase 1 0.950 - 0 Normalized mean entropy S4363
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm8713
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2106
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.780

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