DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mct1 and mct-1

DIOPT Version :9

Sequence 1:NP_001284810.1 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_503655.2 Gene:mct-1 / 189489 WormBaseID:WBGene00021227 Length:544 Species:Caenorhabditis elegans


Alignment Length:614 Identity:182/614 - (29%)
Similarity:278/614 - (45%) Gaps:124/614 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 TPPDGGWGWVVVFGSFMIHIVTDGMTYSFG-IFYNEFLDYFNEGKGYTAWIASIMVGVTFSSGPI 90
            ||||||:|||||..||::::..||:.|:.| |....:.|.|. .......:.||:.|..:.:||:
 Worm    38 TPPDGGYGWVVVAASFLVNMAVDGVIYTCGKILVPIWADQFG-STSVAGAVISILTGCYYLAGPL 101

  Fly    91 SSSFVNRYGCRAVTIAGSILAASCIIVSMFAQNVLTLIITIGFGTGLGFGLIYLPAIVSVTQYFE 155
            :|||||.:|.|:|.|||||||.:..::|.||..:..|.:..|...|:|||.:|||:||.::.||.
 Worm   102 ASSFVNVFGIRSVAIAGSILATTAFLLSRFASTIWELYLLFGVLGGIGFGCMYLPSIVILSTYFA 166

  Fly   156 AKRSLATGIAVCGSGFGTFVFA----PLTEFL---IGNYGWRGAMLIIGGIVLNCIIFGAMFRPL 213
            .|||:||||||||||.||.||:    |:.::.   :|::     |:.:..|.::..:|..:|.||
 Worm   167 KKRSVATGIAVCGSGIGTMVFSTINGPVFDYFGKDVGSF-----MVYLAAIAISGSLFSLLFAPL 226

  Fly   214 ELEAPPQTPPNTPSTPKLAKKSAIIDQNTTAAELEPLKVLPKDQYLQLPQRTDTAVSGGALCRSN 278
            :            :|....||.|.:.:|......||.:.|.:|      .|.|       |...|
 Worm   227 K------------ATEHQVKKVAKMVRNYEGKPEEPTQRLLED------VRND-------LEELN 266

  Fly   279 SVGHNLKPNLNNNSNGAVNGQGPTLVTPPQAVVKSTSNDDIARKCHSQLQLTPLRDAHRERSASG 343
            ..|||                                                            
 Worm   267 RPGHN------------------------------------------------------------ 271

  Fly   344 TMYRPDALYQGSLHNLPDYVSSRNDLSRSMSGSGVIKRYGSLRQSNNVSQSQEEAKCCGCITCSK 408
                .|..|.|   |.|...|..|.|.|..:.|.          ..:|..:.|.......:..||
 Worm   272 ----ADTFYAG---NAPVSRSRSNTLDRKAAESA----------EAHVVHATEHHTVHHVVKKSK 319

  Fly   409 ETRDTFAEMMNFSLLKDMV----FVIFSVSNFCTSIGFNVPYLYVVAYAETLKLTKTDA--SYLI 467
            .|:  |.|.:...|.||::    |:..:||...|.:.|.||::|:....:......|||  |..:
 Worm   320 FTK--FKESLCSVLDKDLLFSPSFMTLAVSGTFTVLSFLVPFVYLALAMKQKNPDFTDAELSLPV 382

  Fly   468 STIGVANTVGRIILGYISDKPWVNRLLVYNVCLTACGVSTAMVPLCHDFQSLAFYCCVFGFTIGA 532
            :.||..|.:.||..|.::|.|.::.|.|.||.....|.|...||.|.:......:|..|...:..
 Worm   383 TLIGAFNIMFRIGCGMVADHPKMSALQVSNVATIIAGTSMLFVPFCTELWHYVVFCIPFSAGVAC 447

  Fly   533 YVGLTSVILVDLLGLDKLTNAFGLLLLFQGIASFIGPPIGGWMYDLTDSYAPAFLMAGLMIAISG 597
            :..|.|||.|:|:|::||:||||:|::|.||.:.:|.||...:.|:|.:|..:|.:.|::.|.||
 Worm   448 FAALRSVICVELIGVEKLSNAFGILMVFMGIGAVVGGPIAAQIKDITGNYDISFYVMGIIFAFSG 512

  Fly   598 LVMFAIPPLQRLQVRKSERKPHTEHLALS 626
            ::...:|.|:..:..|...:..||...:|
 Worm   513 VMTIRLPELKAWEESKKLARAGTEMRVIS 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mct1NP_001284810.1 MFS 35..>213 CDD:119392 72/185 (39%)
MFS <426..604 CDD:119392 59/183 (32%)
mct-1NP_503655.2 MFS_MCT_SLC16 45..519 CDD:340910 170/583 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D352338at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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