DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mct1 and mct-5

DIOPT Version :9

Sequence 1:NP_001284810.1 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_495464.2 Gene:mct-5 / 187995 WormBaseID:WBGene00020168 Length:591 Species:Caenorhabditis elegans


Alignment Length:635 Identity:227/635 - (35%)
Similarity:318/635 - (50%) Gaps:121/635 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PTPPDGGWGWVVVFGSFMIHIVTDGMTYSFGIFYNEFLDYFNEGKGYTAWIASIMVGVTFSSGPI 90
            |.|||||||||||.|||.||:..||..|||||...:.:..||.....|:.|.|::.|.|..:||:
 Worm    12 PLPPDGGWGWVVVIGSFFIHVFADGFVYSFGILAEKLMIEFNSNNTMTSLIVSMLTGFTLGAGPL 76

  Fly    91 SSSFVNRYGCRAVTIAGSILAASCIIVSMFAQNVLTLIITIGFGTGLGFGLIYLPAIVSVTQYFE 155
            :|:..|:||||..||.|:.:|....::|.||..:...:|::|...|:||||:|.||||.||.|||
 Worm    77 ASAVCNKYGCRITTIIGAGVAFVGCLLSCFATEIWHFVISVGVIMGIGFGLVYCPAIVIVTMYFE 141

  Fly   156 AKRSLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLIIGGIVLNCIIFGAMFRPLELEAPPQ 220
            :||||||||||.|:|.|..||.|:..|:|.|||||...::...:::.|.:.||.|.||:....|.
 Worm   142 SKRSLATGIAVAGAGVGAVVFGPINTFIISNYGWRYVFVLFLFVIILCAVCGATFVPLQFALVPD 206

  Fly   221 TPPNTPSTPKLAKKSAIIDQNTTAAELEPLKVLPKDQYLQLPQRTDTAVSGGALCRSNSVGHNLK 285
            ...:.........:...||.|                     :|.:..||               
 Worm   207 DDDDGEYNDVFEDEVKKIDYN---------------------KRFEEKVS--------------- 235

  Fly   286 PNLNNNSNGAVNGQGPTLVTPPQAVVKSTS-------NDDIARKCHS--QLQLTPLRDAH----R 337
                             |::|||.:.:|.|       |:..||...|  .:.|.||....    .
 Worm   236 -----------------LLSPPQVLERSMSQCCDIQKNNQHARPSSSVGAVDLEPLLRPRCGTIG 283

  Fly   338 ERSASGTMYRPDALYQGSLHNLPDYVSSRNDLSRSMSGSGVIKRYGSLRQSNN--------VSQS 394
            ||: ||.:.|.|..|.||:.|:.:: .:..|..||.         |||..:.|        |...
 Worm   284 ERN-SGYLNRKDVFYTGSISNVAEF-RANPDKYRST---------GSLHTALNIHTHHTGTVGDD 337

  Fly   395 QEEAKCCGC------ITCSKETR-----------DTFAEMMNFSLLKDMVFVIFSVSNFCTSIGF 442
            :|...  ||      :...|||.           .|...|.:|.||.|..|::|::||..||:||
 Worm   338 RESGH--GCDQSLDGMNEKKETDFMDDIEGSNMFKTINNMFSFQLLLDPAFLLFAISNLLTSVGF 400

  Fly   443 NVPYLYVVAYAETLKLTKTDASYLISTIGVANTVGRIILGYISDKPWV-----------NRLLVY 496
            |.|..::..:...:......:..::|..|.|||:||:|.|.::|:...           |||.:|
 Worm   401 NSPLYFLPLHVTNILSDNNVSGNILSVYGTANTIGRLIFGVVADQKLPLPAGLGDDTARNRLWMY 465

  Fly   497 NVCLTACGVSTAMVPLCHDFQS---LAFYCCVFGFTIGAYVGLTSVILVDLLGLDKLTNAFGLLL 558
            |:.||.||:.||   .|:.|..   |..|..:|||||.:||.|||||||||||||||||||||||
 Worm   466 NISLTICGIVTA---FCYKFDGYILLDIYAVLFGFTIASYVCLTSVILVDLLGLDKLTNAFGLLL 527

  Fly   559 LFQGIASFIGPPIGGWMYDLTDSYAPAFLMAGLMIAISGLVMFAIPPLQR 608
            |:||:.:.|||.:.|::.|||.:|..:|:..|:.:.:|||::|.||..:|
 Worm   528 LWQGVGTVIGPLVSGYLADLTGNYTLSFVFCGINLMVSGLMLFVIPYFKR 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mct1NP_001284810.1 MFS 35..>213 CDD:119392 82/177 (46%)
MFS <426..604 CDD:119392 82/191 (43%)
mct-5NP_495464.2 MFS_MCT_SLC16 20..573 CDD:340910 217/621 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159668
Domainoid 1 1.000 160 1.000 Domainoid score I2469
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H130007
Inparanoid 1 1.050 364 1.000 Inparanoid score I1263
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28635
OrthoDB 1 1.010 - - D352338at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - otm14164
orthoMCL 1 0.900 - - OOG6_109218
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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