DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mct1 and mct-6

DIOPT Version :9

Sequence 1:NP_001284810.1 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_510705.1 Gene:mct-6 / 181724 WormBaseID:WBGene00015676 Length:594 Species:Caenorhabditis elegans


Alignment Length:642 Identity:225/642 - (35%)
Similarity:321/642 - (50%) Gaps:116/642 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PTPPDGGWGWVVVFGSFMIHIVTDGMTYSFGIFYNEFLDYFNEGKGYTAWIASIMVGVTFSSGPI 90
            |.|||||||||||.|||.:|:..||..||||:.....::.|:......|.|.|::.|:|..|||:
 Worm    15 PLPPDGGWGWVVVLGSFFVHVFADGFVYSFGVLVETLMEEFHASNTMAALIISLLTGLTLGSGPL 79

  Fly    91 SSSFVNRYGCRAVTIAGSILAASCIIVSMFAQNVLTLIITIGFGTGLGFGLIYLPAIVSVTQYFE 155
            :|:..|:||||..||.|:.:|.....:|.||..:..::||:|...|.||||:|.||||.||.|||
 Worm    80 ASAVCNKYGCRITTITGAGVAFVGCALSYFATAMWHIVITVGVIMGTGFGLMYCPAIVIVTMYFE 144

  Fly   156 AKRSLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLIIGGIVLNCIIFGAMFRPLELEAPPQ 220
            .||||||||||.|:|.||.:|||:..|.|.|||||...|....|::.|.:.||.|.|||....|.
 Worm   145 NKRSLATGIAVAGAGVGTVLFAPINAFFINNYGWRSVFLAFLFILVLCALCGATFAPLEFALVPD 209

  Fly   221 TPPNTPSTPKLAKKSAIIDQNT--TAAELEPLKVLPKDQYLQLPQRTDTAVSGGALCRSNSVGHN 283
            .....        ...::|::.  |||..|                                   
 Worm   210 EEEEV--------NDEVLDEDVKKTAANEE----------------------------------- 231

  Fly   284 LKPNLNNNSNGAVNGQGPTLVTPPQAVVKSTSNDDIARKC------HSQLQLTPLRDAHRERSA- 341
                         :|:..||::||..:.:|.|.....:|.      .|.:....:....|.|.. 
 Worm   232 -------------HGEKATLLSPPSLLERSMSQSSGVQKAGEKIRPASSMGAVDVESQPRSRRGT 283

  Fly   342 -----SGTMYRPDALYQGSLHNL------PDYVSSRNDLSRSMSGSGVIKRYGSLRQSNNVSQSQ 395
                 ||.:.|.|..|.||:.|:      ||...|...|....:..|.|..:.:.|..:....|:
 Worm   284 VGERDSGYLNRKDVFYTGSISNVAEFREDPDKYRSTGSLHGRHTTVGSIPAHSTGRLDDVREGSE 348

  Fly   396 EEAKCCGCITCSKETR--------------DTFAEMMNFSLLKDMVFVIFSVSNFCTSIGFNVPY 446
            |::|   .:..|::|.              .|.:.|::..||.:..|::|::||..||:|||.|.
 Worm   349 EDSK---AMDISEKTNGTDNTDNVEGKNMFKTISNMLSLELLLEPTFLLFAISNLLTSVGFNSPL 410

  Fly   447 LYVVAYAETLKLTKTDASYLISTIGVANTVGRIILGYISDKPWV-----------NRLLVYNVCL 500
            .::..:|..:.|.....|.::|..||:|||||||.|.::|....           |||.:||:.|
 Worm   411 YFLPLHATKIGLEPIQGSKVLSAFGVSNTVGRIIFGVVADHKLPLPGGIGNDTARNRLWMYNISL 475

  Fly   501 TACGVSTAMVPLCHDFQS---LAFYCCVFGFTIGAYVGLTSVILVDLLGLDKLTNAFGLLLLFQG 562
            |.||:.|.   .|:.|..   ||.|..:|||:|.:|:.||||||||||||||||||||||||:||
 Worm   476 TICGLLTV---FCYQFNGFIPLATYSALFGFSIASYICLTSVILVDLLGLDKLTNAFGLLLLWQG 537

  Fly   563 IASFIGPPIGGWMYDLTDSYAPAFLMAGLMIAISGLVMFAIPPLQR------LQVRK 613
            :.:..|||:.|::.|:|.:|..:|:..|:.:..|||::|.||..|:      |.::|
 Worm   538 VGTVFGPPVSGYLADMTGNYTLSFVFCGVNLLASGLMLFGIPFFQKKAKAKALAIKK 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mct1NP_001284810.1 MFS 35..>213 CDD:119392 84/177 (47%)
MFS <426..604 CDD:119392 84/191 (44%)
mct-6NP_510705.1 MFS_MCT_SLC16 23..579 CDD:340910 213/617 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159667
Domainoid 1 1.000 158 1.000 Domainoid score I2508
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H130007
Inparanoid 1 1.050 364 1.000 Inparanoid score I1263
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28635
OrthoDB 1 1.010 - - D352338at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - otm14164
orthoMCL 1 0.900 - - OOG6_109218
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2106
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.840

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