DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mct1 and gem-1

DIOPT Version :9

Sequence 1:NP_001284810.1 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_001379120.1 Gene:gem-1 / 181458 WormBaseID:WBGene00008214 Length:771 Species:Caenorhabditis elegans


Alignment Length:733 Identity:164/733 - (22%)
Similarity:282/733 - (38%) Gaps:188/733 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PPARRKSQQQHEACEMDMERQPTPPDGGWGWVVVFGSFMIHIVTDGMTYSFGIFYNEFLDYFNEG 69
            |.:.|......|:.|...|| |...|||:||:||..||::|.|.||.::.|||.:.:..::|..|
 Worm    44 PVSARSDDSDAESVESLTER-PVYKDGGYGWLVVLASFLMHAVCDGASFCFGIVFVKIQEHFQCG 107

  Fly    70 KGYTAWIASIMVGVTFSSGPISSSFVNRYGCR-AVTIAGSILAASCIIVSMFAQNVLTLIITIGF 133
            :..:...||:.:.:.....|::....:..||| ::.|..||...|||| :||..::...:|:.|.
 Worm   108 RFVSMITASMFLSLPLIMSPVAGIVSDILGCRMSIIIGASICTVSCII-AMFCSHIFFFMISFGL 171

  Fly   134 GTGLGFGLIYLPAIVSVTQYFEAKRSLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLIIGG 198
            |.|:|...||..|||.||.|||.:|.|||..||.|:|.||.::..|...         :|:.:..
 Worm   172 GCGVGMSFIYNAAIVIVTYYFEKRRGLATSFAVSGTGVGTVIYPILLNL---------SMIYLAS 227

  Fly   199 IV----LNCIIFGAMF----------RPLELEAPPQTPPNTPSTPKLAKKSAIIDQNTTAAELEP 249
            .|    :..|.|..|:          :.:|.|:.............:||.....:.||.      
 Worm   228 FVSDIRIILIFFAVMYFVIAVIGFFIKDVEWESDKTDFKLRKFQKYIAKMDDEKENNTN------ 286

  Fly   250 LKVLPKDQYLQLPQRTDTAVSGGALCRSNSVGHNLKPNLN--NNSNGAV-----------NGQGP 301
                |.|.:::      .|:|              .||||  ||.:|::           ....|
 Worm   287 ----PTDAFMR------HAIS--------------LPNLNILNNHSGSIQSICDAAKAERKSDKP 327

  Fly   302 T-------------LVTPPQAVVKSTSNDDIARKCHSQLQL-----TPLRDAHRERSASGTMYRP 348
            |             :.:.|:   .|..|.::|...|..|:|     |.:| |.|.|..|......
 Worm   328 TRSKSVALFDNKHQMSSIPE---YSMLNTNLANLEHLDLELANSPCTTVR-AQRRRVISKVSMSV 388

  Fly   349 DA------------LYQGSLHNLPDYVSSRND--------------------------------- 368
            |.            |:|.|..:..|..||.:|                                 
 Worm   389 DQINELEDEAFHINLFQSSTESESDDESSSDDSEMSNDGDSSSSELSEKNLDEPTTKLINKNLEN 453

  Fly   369 --------------LSRSMSGSGVIKRYGSLRQSNNVSQSQEEAKCCG--------CITCSKETR 411
                          ::|:...:|....:|....::|..||:.......        .:...|..:
 Worm   454 VAFRATSSVPNSARMNRNSVAAGTSNMFGGRVIASNAIQSRHATNLIAMGKIPSAPMLVARKNRK 518

  Fly   412 DTFAE-MMNF-------------SLLKDMVFVIFSVSNFCTSIGFNVPYLYVVAYA-ETLKLTKT 461
            ....: :..|             .::....::..::|..|.....:|||:....|: :|||:.::
 Worm   519 SMIGKPIQGFYKKWLETEKPIYQEVIHCRAYIYLALSVLCLYFILDVPYVCFYEYSIDTLKMEES 583

  Fly   462 DASYLISTIGVANTVGRIILGYISDKPWVNRLL--VYNVCLTACGVSTAMVPLCHDFQSLAFYCC 524
            :|:|:..:||::|.:..::.|.::|  |..:.:  :|...:...|::.......:....|.....
 Worm   584 EANYIYYSIGISNFISVLLFGTLAD--WTRKHITTIYASSMVGVGITIMFSTRINSLVELVIVGV 646

  Fly   525 VFGFTIGAYVGLTSVIL------VDLLGLDKLTNAFGLLLLFQGIASFIGPPIGGWMYDLTDSYA 583
            .||.||.:...|.|:::      |:|..:     |:.|:.:.:|:||.|||||...:.:.|..|.
 Worm   647 CFGVTITSNYVLQSILVTICFEDVNLFQV-----AYSLIAMIEGVASLIGPPIFALVREATGGYT 706

  Fly   584 PAFLMAGLMIAISGLVMF 601
            ..|.::|:....||...|
 Worm   707 VVFFISGIFALASGFFGF 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mct1NP_001284810.1 MFS 35..>213 CDD:119392 60/192 (31%)
MFS <426..604 CDD:119392 45/185 (24%)
gem-1NP_001379120.1 MFS 72..>254 CDD:421695 61/191 (32%)
MFS <543..727 CDD:421695 45/189 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D352338at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.920

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