DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mct1 and mct-4

DIOPT Version :9

Sequence 1:NP_001284810.1 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_001041267.1 Gene:mct-4 / 180766 WormBaseID:WBGene00003986 Length:777 Species:Caenorhabditis elegans


Alignment Length:731 Identity:211/731 - (28%)
Similarity:343/731 - (46%) Gaps:135/731 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVHGPPARRKSQQQHEACEMDMERQ---------------------------------------- 25
            |..||...|.||.......:..||.                                        
 Worm     1 MTDGPDPNRSSQPTSPTKSLKSERNGESNFEEDDQDIGSLNDGQLTNYSSQYSINMGVQQVEPLL 65

  Fly    26 -PTPPDGGWGWVVVFGSFMIHIVTDGMTYSFGIFYNEFLDYFNEGKGYTAWIASIMVGVTFSSGP 89
             |..||||:|||:||.:||.::|.||::.:|..|...:.:.:.|..|.|.:|.|:::|.....||
 Worm    66 VPQAPDGGYGWVIVFAAFMSNLVVDGISTAFSEFKQSYKERYQESDGLTVFIGSLIIGTYLLVGP 130

  Fly    90 ISSSFVNRYGCRAVTIAGSILAASCIIVSMFAQNVLTLIITIGFGTGLGFGLIYLPAIVSVTQYF 154
            :.|:..|:|..|.|.:||.:::....:::..:.|:...::..|...|||||:|||||||.|..||
 Worm   131 LVSALCNKYEQRYVVMAGGLISGIAFMIAPASPNIYVFMLIYGVMGGLGFGMIYLPAIVVVGFYF 195

  Fly   155 EAKRSLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLIIGGIVLNCIIFGAMFRPLELEAPP 219
            ::||::||||:|.|||.|||:...:.:..|.|.||:..:.::..::.:|:.:|.::|||     |
 Worm   196 DSKRAMATGISVAGSGVGTFLVPLICQVCIANLGWQKTIWVLAVMIFSCVFYGYLYRPL-----P 255

  Fly   220 QTPPNTPSTPKLAKKSAIIDQNTTAAELEPLK-VLPK-----DQYLQL--PQRTDTAVSGGALCR 276
            ....|           .|.||     |:|||: .|.|     |:.::.  |.|:.:|.||.  ..
 Worm   256 MVDLN-----------EIRDQ-----EMEPLRQALSKVEDDEDEAVESPHPNRSTSAASGA--IE 302

  Fly   277 SNSVGHN-----LKPNLNNNSNGAVNGQGPTLVTPPQAVVKS-----TSND------DIAR---K 322
            ..:|..|     |:..|.....|:...:............:|     |||.      .::|   .
 Worm   303 DEAVSQNPEVQRLRSILTEGDEGSETPKSDAHKVRSHTATRSRKHTMTSNSGSQHDLKLSRGNLS 367

  Fly   323 CHSQLQLTPLRDAHR---ERSASG-------------------TMYRPDALYQGSLHNLPD---- 361
            ..::|.....||.::   :.|.||                   .|.|.|..|.||:.||.:    
 Worm   368 SDNRLSRVSARDFNQSLSKLSKSGGASNLSIAMSGVDPKEFQRPMNRQDIFYGGSIQNLKEFKEE 432

  Fly   362 -----YVSSRNDLSRSMSGSGV----IKRYGSLRQSNNVSQSQEEA-------KCCGCITCSKET 410
                 |.:|...:.||:.|..|    :.|.||......:::.:||.       .||..:..  ..
 Worm   433 GTMAGYRASTLSIPRSVVGQAVSQLNLSRTGSRLGGPGIAEDEEEMIEPFVDDGCCKVLPL--PM 495

  Fly   411 RDTFAEMMNFSLLKDMVFVIFSVSNFCTSIGFNVPYLYVVAYAETLKLTKTDASYLISTIGVANT 475
            |:..:||::.:|||:...:|..:||....:||.:|.:::...:|::||..:.|.:|:...||.||
 Worm   496 RNALSEMIDLNLLKNKTMMILCISNLLGMMGFYIPIMFLKDLSESMKLDMSLAMFLVPIFGVFNT 560

  Fly   476 VGRIILGYISDKPWVNRLLVYNVCLTACGVSTAMVPLCHDFQSLAFYCCVFGFTIGAYVGLTSVI 540
            :||:..|:::|:..::.|.:.|:.|...|:.|...||........||..||||.|.||:.|||::
 Worm   561 IGRVFFGWLTDQKILSALTINNLSLIVSGLLTLACPLLTSIAGQYFYAIVFGFIISAYICLTSIV 625

  Fly   541 LVDLLGLDKLTNAFGLLLLFQGIASFIGPPIGGWMYDLTDSYAPAFLMAGLMIAISGLVMFAIPP 605
            |.||:||:.|||:||||::.:||||.:|||..|.:||:|.||..||...||::.::||:...||.
 Worm   626 LADLMGLENLTNSFGLLVVARGIASLVGPPFAGIVYDITGSYDTAFYFGGLVLLVAGLISATIPF 690

  Fly   606 LQRLQVRKSERKPHTE 621
            :.:.....::..|..:
 Worm   691 VTKKDADTADGMPQLQ 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mct1NP_001284810.1 MFS 35..>213 CDD:119392 63/177 (36%)
MFS <426..604 CDD:119392 69/177 (39%)
mct-4NP_001041267.1 MFS_MCT_SLC16 75..>252 CDD:340910 63/176 (36%)
MFS_MCT_SLC16 <507..689 CDD:340910 72/181 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28635
OrthoDB 1 1.010 - - D352338at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.030

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