DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mct1 and slc16a1a

DIOPT Version :10

Sequence 1:NP_477334.2 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_001243569.1 Gene:slc16a1a / 100534752 ZFINID:ZDB-GENE-110408-16 Length:461 Species:Danio rerio


Alignment Length:616 Identity:140/616 - (22%)
Similarity:229/616 - (37%) Gaps:209/616 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 TPPDGGWGWVVVFGSFMIHIVTDGMTYSF----GIFYNEFLDYFNEGKGYTAWIASIMVGVTFSS 87
            |||:|||||.||.|:|    ::.|.:|:|    .:|:.|....||......:||:|||:.|.:..
Zfish    12 TPPEGGWGWAVVLGAF----ISIGFSYAFPKSITVFFKEIEVIFNATSSQVSWISSIMLAVMYGG 72

  Fly    88 GPISSSFVNRYGCRAVTIAGSILAASCIIVSMFAQNVLTLIITIGFGTGLGFGLIYLPAIVSVTQ 152
            ||:||..||:||.|.:.|.|..|:.:.:|.:.|...|..|...:|...|||......||:..:.:
Zfish    73 GPVSSILVNKYGSRPIMILGGCLSGAGLIAASFCNTVEGLYFCVGVVGGLGLAFNLNPALTMIGK 137

  Fly   153 YFEAKRSLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLIIGGIVLNCIIFGAMFRPLELEA 217
            ||..||.:|.|||:.||.......|||..:....:||||:.||:||::|||.:.|::.||:    
Zfish   138 YFYKKRPIANGIAMAGSPVFLSTLAPLNTWFFDQFGWRGSFLILGGLLLNCCVAGSLMRPI---- 198

  Fly   218 PPQTPPNTPSTPKLAKKSAIIDQNTTAAELEPLKVLPKDQYLQLPQRTDTAVSGGALCRSNSVGH 282
                                                                             
Zfish   199 ----------------------------------------------------------------- 198

  Fly   283 NLKPNLNNNSNGAVNGQGPTLVTPPQAVVKSTSNDDIARKCHSQLQLTPLRDAHRERSASGTMYR 347
                             ||    .||..||:                                  
Zfish   199 -----------------GP----KPQPAVKA---------------------------------- 208

  Fly   348 PDALYQGSLHNLPDYVSSRNDLSRSMSGSGVIKRYGSLRQSNNVSQSQEEAKCCGCITCSKETRD 412
                                                    .|:.|:::|              |.
Zfish   209 ----------------------------------------DNSNSRAKE--------------RK 219

  Fly   413 TFAEMMN----FSLLKDMVFVIFSVSNFCTSIGFNVPYLYVVAYAETLKLTKTDASYLISTIGVA 473
            |..|::|    .:|.|...|:::.:.|.....|...|.:::..||::.::.:..|::|:|.:...
Zfish   220 TVVEVINGFIDLTLFKHRGFLLYLLGNVVMFFGLFSPLVFLSNYAKSKQIPREKAAFLLSILAFV 284

  Fly   474 NTVGRIILGYISDKPW----VNRLLVYNVCLTACGVSTAMVPLCHDFQSLAFYCCVFGFTIGAYV 534
            :.|.|..:|.:::..|    |......::.|.  ||...:.||..|:.....|...|||..|   
Zfish   285 DMVARPSMGIVANTKWVRPRVQHFFAASILLN--GVCHLLAPLSTDYTGFVIYAIFFGFAFG--- 344

  Fly   535 GLTSVI---LVDLLGLDKLTNAFGLLLLFQGIASFIGPPIGGWMYDLTDSYAPAFLMAGLMIAIS 596
            .|:||:   |:||:|..:.::|.||:.:.:.....:|||:.|...|:...|...::..|:::.|.
Zfish   345 WLSSVLFETLMDLVGAQRFSSAVGLVTIVECGPVLLGPPLLGKFNDIYHDYKYTYMGCGIVLLIG 409

  Fly   597 GLVMFA-----IPPLQRLQVRKSERKPHTEH 622
            .|.:|.     ...|:|  ..|.|.|...:|
Zfish   410 SLFLFVGMGINYKLLER--EAKEESKKANQH 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mct1NP_477334.2 MFS_MCT_SLC16 34..604 CDD:340910 128/589 (22%)
slc16a1aNP_001243569.1 MFS_MCT1 19..417 CDD:340984 128/584 (22%)

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