DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mct1 and slc16a1a

DIOPT Version :9

Sequence 1:NP_001284810.1 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_001243569.1 Gene:slc16a1a / 100534752 ZFINID:ZDB-GENE-110408-16 Length:461 Species:Danio rerio


Alignment Length:616 Identity:140/616 - (22%)
Similarity:229/616 - (37%) Gaps:209/616 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 TPPDGGWGWVVVFGSFMIHIVTDGMTYSF----GIFYNEFLDYFNEGKGYTAWIASIMVGVTFSS 87
            |||:|||||.||.|:|    ::.|.:|:|    .:|:.|....||......:||:|||:.|.:..
Zfish    12 TPPEGGWGWAVVLGAF----ISIGFSYAFPKSITVFFKEIEVIFNATSSQVSWISSIMLAVMYGG 72

  Fly    88 GPISSSFVNRYGCRAVTIAGSILAASCIIVSMFAQNVLTLIITIGFGTGLGFGLIYLPAIVSVTQ 152
            ||:||..||:||.|.:.|.|..|:.:.:|.:.|...|..|...:|...|||......||:..:.:
Zfish    73 GPVSSILVNKYGSRPIMILGGCLSGAGLIAASFCNTVEGLYFCVGVVGGLGLAFNLNPALTMIGK 137

  Fly   153 YFEAKRSLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLIIGGIVLNCIIFGAMFRPLELEA 217
            ||..||.:|.|||:.||.......|||..:....:||||:.||:||::|||.:.|::.||:    
Zfish   138 YFYKKRPIANGIAMAGSPVFLSTLAPLNTWFFDQFGWRGSFLILGGLLLNCCVAGSLMRPI---- 198

  Fly   218 PPQTPPNTPSTPKLAKKSAIIDQNTTAAELEPLKVLPKDQYLQLPQRTDTAVSGGALCRSNSVGH 282
                                                                             
Zfish   199 ----------------------------------------------------------------- 198

  Fly   283 NLKPNLNNNSNGAVNGQGPTLVTPPQAVVKSTSNDDIARKCHSQLQLTPLRDAHRERSASGTMYR 347
                             ||    .||..||:                                  
Zfish   199 -----------------GP----KPQPAVKA---------------------------------- 208

  Fly   348 PDALYQGSLHNLPDYVSSRNDLSRSMSGSGVIKRYGSLRQSNNVSQSQEEAKCCGCITCSKETRD 412
                                                    .|:.|:::|              |.
Zfish   209 ----------------------------------------DNSNSRAKE--------------RK 219

  Fly   413 TFAEMMN----FSLLKDMVFVIFSVSNFCTSIGFNVPYLYVVAYAETLKLTKTDASYLISTIGVA 473
            |..|::|    .:|.|...|:::.:.|.....|...|.:::..||::.::.:..|::|:|.:...
Zfish   220 TVVEVINGFIDLTLFKHRGFLLYLLGNVVMFFGLFSPLVFLSNYAKSKQIPREKAAFLLSILAFV 284

  Fly   474 NTVGRIILGYISDKPW----VNRLLVYNVCLTACGVSTAMVPLCHDFQSLAFYCCVFGFTIGAYV 534
            :.|.|..:|.:::..|    |......::.|.  ||...:.||..|:.....|...|||..|   
Zfish   285 DMVARPSMGIVANTKWVRPRVQHFFAASILLN--GVCHLLAPLSTDYTGFVIYAIFFGFAFG--- 344

  Fly   535 GLTSVI---LVDLLGLDKLTNAFGLLLLFQGIASFIGPPIGGWMYDLTDSYAPAFLMAGLMIAIS 596
            .|:||:   |:||:|..:.::|.||:.:.:.....:|||:.|...|:...|...::..|:::.|.
Zfish   345 WLSSVLFETLMDLVGAQRFSSAVGLVTIVECGPVLLGPPLLGKFNDIYHDYKYTYMGCGIVLLIG 409

  Fly   597 GLVMFA-----IPPLQRLQVRKSERKPHTEH 622
            .|.:|.     ...|:|  ..|.|.|...:|
Zfish   410 SLFLFVGMGINYKLLER--EAKEESKKANQH 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mct1NP_001284810.1 MFS 35..>213 CDD:119392 66/181 (36%)
MFS <426..604 CDD:119392 45/189 (24%)
slc16a1aNP_001243569.1 2A0113 6..446 CDD:273325 140/616 (23%)
MFS 20..415 CDD:119392 126/581 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578874
Domainoid 1 1.000 142 1.000 Domainoid score I4621
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm6360
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.850

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