DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mct1 and slc16a2

DIOPT Version :9

Sequence 1:NP_001284810.1 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster
Sequence 2:XP_031747020.1 Gene:slc16a2 / 100494635 XenbaseID:XB-GENE-980579 Length:499 Species:Xenopus tropicalis


Alignment Length:606 Identity:130/606 - (21%)
Similarity:212/606 - (34%) Gaps:190/606 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PDGGWGWVVVFGSFMIHIVTDGMTYSFGIFY----NEFLDYFNEGKGY-TAWIASIMVGVTFSSG 88
            |:||:|||||..:........|:..||||.|    .|......:|..: |||:.|:.:|:.|...
 Frog    52 PEGGFGWVVVLAATWCSGSIFGIQNSFGIIYVMLQGEMDGTEEQGMDFKTAWVGSLAMGMIFFCS 116

  Fly    89 PISSSFVNRYGCRAVTIAGSILAASCIIVSMFAQNVLTLIITIGFGTGLGFGLIYLPAIVSVTQY 153
            |:.|.|.:|.|||..:..|:.||...::.|.|.:::.....|.|...|.|....:.|::|.:..|
 Frog   117 PVVSIFTDRLGCRKTSSGGAALAFIGLLSSSFTKSLGVRYFTYGILFGCGCSFAFQPSLVILGHY 181

  Fly   154 FEAKRSLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLIIGGIVLNCIIFGAMFRPLELEAP 218
            |:.:..|..|| |.|   |:.||.....||         :.::||                    
 Frog   182 FKKRLGLVNGI-VAG---GSCVFTMCLPFL---------LKMMGG-------------------- 213

  Fly   219 PQTPPNTPSTPKLAKKSAIIDQNTTAAELEPLKVLPKDQYLQLPQRTDTAVSGGALCRSNSVGHN 283
                             ||..|:|       .:||....::|:                 .:...
 Frog   214 -----------------AIGLQHT-------FQVLSVFMFIQI-----------------FLSLT 237

  Fly   284 LKPNLNNNSNGAVNGQGPTLVTPPQAVVKSTSNDDIARKCHSQLQLTPLRDAHRERSASGTMYRP 348
            .||                |:.||                                         
 Frog   238 FKP----------------LLPPP----------------------------------------- 245

  Fly   349 DALYQGSLHNLPDYVSSRNDLSRSMSGSGVIKRYGSLRQSNNVSQSQEEAKCCG---CITCSKET 410
                                                      |..|:|:.|..|   ...|...|
 Frog   246 ------------------------------------------VDFSKEKEKVAGRSKAQQCMAHT 268

  Fly   411 RDTFAEMMNFSLLKDMVFVIFSVSNFCTSIGFNVPYLYVVAYAETLKLTKTDASYLISTIGVANT 475
            |..|    |..:.:...:.|:::....|.:|:.|||::::.:.|......|....|:..||..:.
 Frog   269 RKYF----NMQVFRRKTYTIWALGIATTVLGYFVPYVHLIKFVEQRFKENTKEWVLLVCIGATSG 329

  Fly   476 VGRIILGYISDK-PWVNRLLVYNVCLTACGVSTAMVPLCHDFQSLAFYCCVFGFTIGAYVGLTSV 539
            :||:..|.|.|. |.:.::.:........|:.:.|:|||..|:|:...|...|...|..:.:.|.
 Frog   330 IGRLASGRIGDSIPGLKKIYLQVASFLLLGILSMMLPLCQVFESVIVVCLFLGLCDGFLISMMSP 394

  Fly   540 ILVDLLGLDKLTNAFGLLLLFQGIASFIGPPIGGWMYDLTDSYAPAFLMAGLMIAISGLVMFAIP 604
            |..:|:|..:.:.|.|.:|....|....||||.|.:.|...||..||.:||:...|..:|:.::|
 Frog   395 IAFELVGPMQASQAIGYVLGLMSIPMTAGPPIAGLLRDYCGSYDLAFYLAGIPPLIGAMVLLSVP 459

  Fly   605 PLQRLQVRK----SERKPHTE 621
            .:....::|    .|.|..|:
 Frog   460 LVHERDLKKKRQMEEEKEKTQ 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mct1NP_001284810.1 MFS 35..>213 CDD:119392 50/182 (27%)
MFS <426..604 CDD:119392 49/178 (28%)
slc16a2XP_031747020.1 MFS_MCT8 57..459 CDD:341023 122/578 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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