DRSC/TRiP Functional Genomics Resources

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Protein Alignment pn and Prune1

DIOPT Version :9

Sequence 1:NP_476684.1 Gene:pn / 31194 FlyBaseID:FBgn0003116 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_775482.1 Gene:Prune1 / 229589 MGIID:1925152 Length:454 Species:Mus musculus


Alignment Length:379 Identity:125/379 - (32%)
Similarity:191/379 - (50%) Gaps:55/379 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 AAAPDVSGRKLHLVMGNESCDLDSAVSAVTLAFVYAQRHREHD-YVPILNIPRRDYPLKTEVGHL 90
            ||..|  .|.||:|:|||:|||||.|||:.|||...:.....| ::|:|||.|.:.||:.:....
Mouse    10 AALQD--SRPLHVVLGNEACDLDSMVSALALAFYLTKTSEAEDIFIPVLNIKRSELPLRGDNVFF 72

  Fly    91 FVKCGIAEPVLLFRDDIPREVVQ---DVNVILVDHHVSP-----LAPNVTEILDHRPLEDSSPSF 147
            ..:..|.||.|:|||:|....:.   .:.:||||||:.|     |...|.|:|||||:|.     
Mouse    73 LQEVKIPEPALIFRDEIDLLALHQAGQLTLILVDHHILPKSDAALEEAVAEVLDHRPIEQ----- 132

  Fly   148 KQLPTLCQLDIDASVGSCATLVAQRYL---AEDQPRSTSVAQLLHATIVLDTINFAPAAKRYGPK 209
            |..|. |.:.::. ||||||||.:|.|   .|...|.|  |.|||.||:||.:|......:..||
Mouse   133 KYCPP-CHVSVEL-VGSCATLVTERILQGAPETLDRQT--AALLHGTIILDCVNMDTNIGKATPK 193

  Fly   210 DEAMVQKLESEL----NRKDAQRSSLFDELVAARADISKLTLTEVLRKDMKVLQTDRQVVPLAGM 270
            |...|::||:..    .|||     :||.|..|:.|:|.||..::||||.|.:......|.::.:
Mouse   194 DSKYVEELEALFPDLPKRKD-----IFDSLQKAKFDVSGLTTEQMLRKDQKTVYRQGTKVAISAI 253

  Fly   271 PILVRDFVEKSGAEKAVREFGVES--NLLVILGMYVSPADGQVQRDLAL--------ISLSGQGQ 325
            .:.::.|::::.....:..|..:.  :.||.:.::.:..:..| |.||:        :::.|   
Mouse   254 YMDLKAFLQRTDLFTDLSSFCHDHSYDALVAMTIFFNTQNEPV-RQLAIFCPHEALRMTICG--- 314

  Fly   326 FVQRVQQALMESNDPKLELRPHEVDTRFMGGCFLRQHNVQATRKHILPIVKRAL 379
                   .|..|..|.|:|.|  :.:.........|.|.|.:||.:||:::.||
Mouse   315 -------ILERSTSPPLKLTP--IPSTSPNLQAYHQGNTQVSRKKLLPVLQEAL 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pnNP_476684.1 PPX1 39..379 CDD:224148 117/365 (32%)
DHHA2 235..377 CDD:280923 34/151 (23%)
Prune1NP_775482.1 PPX1 21..286 CDD:224148 99/278 (36%)
DHH motif. /evidence=ECO:0000250 106..108 1/1 (100%)
DHHA2 218..357 CDD:280923 34/151 (23%)
Essential for homodimerization. /evidence=ECO:0000250 394..421
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 397..420
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842470
Domainoid 1 1.000 97 1.000 Domainoid score I7266
eggNOG 1 0.900 - - E1_COG1227
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41429
Inparanoid 1 1.050 156 1.000 Inparanoid score I4284
Isobase 1 0.950 - 0 Normalized mean entropy S4890
OMA 1 1.010 - - QHG59046
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005774
OrthoInspector 1 1.000 - - oto92440
orthoMCL 1 0.900 - - OOG6_103741
Panther 1 1.100 - - LDO PTHR12112
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R978
SonicParanoid 1 1.000 - - X6260
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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