DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4ae1 and Cyp26c1

DIOPT Version :9

Sequence 1:NP_525044.1 Gene:Cyp4ae1 / 31193 FlyBaseID:FBgn0015036 Length:496 Species:Drosophila melanogaster
Sequence 2:XP_217935.3 Gene:Cyp26c1 / 308190 RGDID:1308843 Length:518 Species:Rattus norvegicus


Alignment Length:520 Identity:126/520 - (24%)
Similarity:206/520 - (39%) Gaps:76/520 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLVVLLVALLVTRLVASLFRLALKELRHPLQGVVPSVSRVPLLGAAWQMRSFQPDNLH-----DK 60
            ||.....|||...|:..|.: .|..||..|.....|...:|.....|   .|..:.||     .:
  Rat    11 MLGAAGTALLCAGLLLGLAQ-QLWTLRWTLSRDWASTLPLPKGSMGW---PFFGETLHWLVQGSR 71

  Fly    61 F-AEYVKRFGRSFMGTVLGHVVMVTAEPRHIDALLQGQHQLKKGTMYFALRGWLGDGLLLSRGKE 124
            | :...:|:|..|...:||..|:..:...::..:|.|:|:|.:.....:....||...||....|
  Rat    72 FHSSRRERYGTVFKTHLLGRPVIRVSGAENVRTILLGEHRLVRSQWPQSAHILLGSHTLLGAVGE 136

  Fly   125 WHTM-RKIITPTFHFSILEQFVEVFDRQSSILVERLRTLSYGNEVVNIYPLVGLAALDIITETAM 188
            .|.. ||::...|....|||||   .|....|...:|:.......|.:|.........:.....:
  Rat   137 RHRQRRKVLARVFSRPALEQFV---PRLQEALRREVRSWCAAQRPVAVYQAAKALTFRMAARILL 198

  Fly   189 GVNVDAQGADSEVVHAVKDLTNILATRFMRPHLLFPHLFRLCWP-----SGFRKQQAGVICLHEF 248
            |:.:|......            ||..|.|   |..:||.|  |     ||.||.......|::.
  Rat   199 GLQLDEARCTE------------LAQTFER---LVENLFSL--PLDVPFSGLRKGIRARDQLYQH 246

  Fly   249 TNGIIEQRRRLLAREANQDKPTKPHALLDTLLRATVD-GQPLTDKQIRDEVNTFIFEGHDTTTSA 312
            .:.:|.::.|       ::...:|...|..::.:..: |:.|:.:::::.....:|....||.||
  Rat   247 LDEVIAEKLR-------EELTAEPGDALHLIINSARELGRELSVQELKELAVELLFAAFFTTASA 304

  Fly   313 VSFCLYLLSRHEAVQQKLFEELRMH-YGQ-------------------DLFRGVILSDFATLPYL 357
            .:..:.||.:|.|...|:.:||... .|.                   ||...|:    ..|.|:
  Rat   305 STSLILLLLQHPAAIAKIQQELSAQGLGSPCSCAPRASGSRPDCSCEPDLSLAVL----GRLRYV 365

  Fly   358 SCVVKESLRLYPPIPAVARCLEKDLVIDEGYIPVGTNVVVLLWQLLRDEAIF-TDPLVFQPERHL 421
            .|||||.|||.||:....|...:...:|...||.|.:|:..:.......|:: :.|..|.||| .
  Rat   366 DCVVKEVLRLLPPVSGGYRTALRTFELDGYQIPKGWSVMYSIRDTHETAAVYRSPPEGFDPER-F 429

  Fly   422 GEEAPRL----SPYSYIPFSAGPRNCIGQKFALLEMKTMVTKVIR--HYQLLPMGADVEPSIKIV 480
            |.|:...    ..:.||||..|.|:|:||:.|...::.:..:::|  .::|......|..::.||
  Rat   430 GVESEDARGSGGRFHYIPFGGGARSCLGQELAQAVLQLLAVELVRTARWELATPAFPVMQTVPIV 494

  Fly   481  480
              Rat   495  494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ae1NP_525044.1 p450 35..486 CDD:278495 115/486 (24%)
Cyp26c1XP_217935.3 p450 40..500 CDD:299894 115/490 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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