DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4ae1 and Cyp4f39

DIOPT Version :10

Sequence 1:NP_525044.1 Gene:Cyp4ae1 / 31193 FlyBaseID:FBgn0015036 Length:496 Species:Drosophila melanogaster
Sequence 2:XP_234837.3 Gene:Cyp4f39 / 299566 RGDID:1308796 Length:550 Species:Rattus norvegicus


Alignment Length:531 Identity:161/531 - (30%)
Similarity:273/531 - (51%) Gaps:64/531 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VVLLVALLVTRLVASLFRLALK--ELRHPLQGVVPSVSRVP-------LLGAAWQMRSFQP---- 54
            |.:|.|||:. |:..||||.|:  :|....:.....:|..|       |||   .|..:.|    
  Rat    21 VYVLSALLLF-LLFLLFRLLLQAFKLFSDFRITCRRLSCFPEPPGRHWLLG---HMSMYLPNEKG 81

  Fly    55 --------DNLHDKFAEYVKRFGRSFMGTVLGHVVMVTAEPRHIDALLQGQHQL--KKGTMYFAL 109
                    |.:|.....:|        |..|..:|:|  .|.:|..:|.....:  |....|..|
  Rat    82 LQNEKKVLDTMHHIILAWV--------GPFLPLLVLV--HPDYIKPVLGASAAIAPKDEFFYSFL 136

  Fly   110 RGWLGDGLLLSRGKEWHTMRKIITPTFHFSILEQFVEVFDRQSSILVERLRT-LSYGNEV-VNIY 172
            :.|||||||:|:|.:|...|:::||.|||.||:.::::|::..:|:..:.|. |:.|:.. .:::
  Rat   137 KPWLGDGLLISKGNKWSRHRRLLTPAFHFDILKPYMKIFNQSVNIMHAKWRRHLAEGSVTSFDMF 201

  Fly   173 PLVGLAALDIITETAMGVNVDAQGADSEVVHAVKDLTNILATRFMRPHLLFPHLFRLCWPSGFRK 237
            ..|.|..||.:.:.....:.|.|...|:.:.::.:|:.::..|..|.|.....::.|. ..|.|.
  Rat   202 EHVSLMTLDSLQKCVFSYSSDCQEKLSDYISSIIELSALVVRRQYRLHHYLDFIYYLT-ADGRRF 265

  Fly   238 QQAGVIC--LHEFTNGIIEQRRRLLAREANQD-----KPTKPHALLDTLLRA-TVDGQPLTDKQI 294
            :||   |  :|.||..:|:||||.| ||...:     |..|....:|.||.| ..:|:.|:|:.|
  Rat   266 RQA---CDTVHNFTTEVIQQRRRAL-RELGAEAWLKAKQGKTLDFIDVLLLAKDEEGKELSDEDI 326

  Fly   295 RDEVNTFIFEGHDTTTSAVSFCLYLLSRHEAVQQKLFEELRMHYGQDLFRGVIL-----SDFATL 354
            |.|.:||:|||||||:|.:|:.|:.|:::...|.|..||:     |::.:|..|     .|...|
  Rat   327 RAEADTFMFEGHDTTSSGLSWALFNLAKYPEYQDKCREEI-----QEVMKGRELEELDWDDLTQL 386

  Fly   355 PYLSCVVKESLRLYPPIPAVARCLEKDLVIDEG-YIPVGTNVVVLLWQLLRDEAIFTDPLVFQPE 418
            |:.:..:|||||.:||:..::|...:|:.:.:| .||.|...:|.::....:..::.|..|:.|.
  Rat   387 PFTTMCIKESLRQFPPVTLISRRCTEDIKLPDGRIIPKGIICLVSIYGTHYNPLVWPDSKVYNPY 451

  Fly   419 RHLGEEAPRLSPYSYIPFSAGPRNCIGQKFALLEMKTMVTKVIRHYQL-LPMGADVEPSIKIVLR 482
            |...:...:.||.:::||||||||||||.||:.||:.:|...:..::| :.....|....:::||
  Rat   452 RFDPDIPQQRSPLAFVPFSAGPRNCIGQSFAMAEMRVVVALTLLRFRLSVDRTRKVRRKPELILR 516

  Fly   483 SKSGVNVGLRP 493
            :::|:.:.:.|
  Rat   517 TENGLWLNVEP 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ae1NP_525044.1 CYP4 76..489 CDD:410721 137/431 (32%)
Cyp4f39XP_234837.3 CYP4F 82..523 CDD:410772 141/460 (31%)

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