DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4ae1 and Cyp4f6

DIOPT Version :9

Sequence 1:NP_525044.1 Gene:Cyp4ae1 / 31193 FlyBaseID:FBgn0015036 Length:496 Species:Drosophila melanogaster
Sequence 2:XP_006241111.1 Gene:Cyp4f6 / 266689 RGDID:708365 Length:538 Species:Rattus norvegicus


Alignment Length:539 Identity:168/539 - (31%)
Similarity:287/539 - (53%) Gaps:67/539 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLVVLLVALLVTRLVASLFRLALKELRHPLQGVVPSVSRVPLLGAAW---------QMRSF-QPD 55
            ||.:.|..|.:..|.||.:.|.|      |.|....::|:    .||         ::|.| ||.
  Rat     2 MLQLSLSRLGMGSLTASPWHLLL------LGGASWILARI----LAWIYTFYDNCCRLRCFPQPP 56

  Fly    56 ------------NLHDKFAEYVKRFGRSFMGTVLGHV-----VMVTAEPRHIDALLQGQHQL--K 101
                        ..:::..:::...||:|....|..|     ::....|..|..|||....:  |
  Rat    57 KPSWFWGHLTLMKNNEEGMQFIAHLGRNFRDIHLSWVGPVYPILRLVHPNVIAPLLQASAAVAPK 121

  Fly   102 KGTMYFALRGWLGDGLLLSRGKEWHTMRKIITPTFHFSILEQFVEVFDRQSSILVERLRTL-SYG 165
            :.|:|..|:.|||||||:|.|::|:..|:::||.|||.||:.:|::|::..:.:..:.:.| :.|
  Rat   122 EMTLYGFLKPWLGDGLLMSAGEKWNHHRRLLTPAFHFDILKSYVKIFNKSVNTMHAKWQRLTAKG 186

  Fly   166 NEVVNIYPLVGLAALDIITETAMGVNVDAQGADSEVVHAVKDLTNILATRFMRPHLLFPHLFRLC 230
            :..::::..:.|..||.:.:.....:.:.|.::||.:.|:.:|::::..|..:|.|....|:.|.
  Rat   187 SARLDMFEHISLMTLDSLQKCIFSFDSNCQESNSEYIAAILELSSLIVKRQRQPFLYLDFLYYLT 251

  Fly   231 WPSGFRKQQAGVIC--LHEFTNGIIEQRRRLLAREANQD-----KPTKPHALLDTLLRATVD-GQ 287
             ..|.|.::|   |  :|.||:.:|.:||..|..:...:     ..||....:|.||.|..: |:
  Rat   252 -ADGRRFRKA---CDVVHNFTDAVIRERRSTLNTQGVDEFLKARAKTKTLDFIDVLLLAKDEHGK 312

  Fly   288 PLTDKQIRDEVNTFIFEGHDTTTSAVSFCLYLLSRHEAVQQKLFEELRMHYGQDLFRG-----VI 347
            .|:|..||.|.:||:|.|||||.||:|:.||.|:||...|::..:|:|     :|.|.     :.
  Rat   313 GLSDVDIRAEADTFMFGGHDTTASALSWILYNLARHPEYQERCRQEVR-----ELLRDREPEEIE 372

  Fly   348 LSDFATLPYLSCVVKESLRLYPPIPAVARCLEKDLVIDEG-YIPVGTNVVVLLWQLLRDEAIFTD 411
            ..|.|.||:|:..:||||||:||:..::||..:|:|:.:| .||.|...|:.::.:..:.:::.|
  Rat   373 WDDLAQLPFLTMCIKESLRLHPPVLLISRCCSQDIVLPDGRVIPKGNICVISIFGVHHNPSVWPD 437

  Fly   412 PLVFQPERHLGEEAPRLSPYSYIPFSAGPRNCIGQKFALLEMKTMVTKVIRHYQLLPMGADVEPS 476
            |.|:.|.|...|...:.||.::|||||||||||||.||:.|:|..:...:..:.:||  .|.||.
  Rat   438 PEVYNPFRFDPENPQKRSPLAFIPFSAGPRNCIGQTFAMSEIKVALALTLLRFCVLP--DDKEPR 500

  Fly   477 IK--IVLRSKSGVNVGLRP 493
            .|  ::||::.|:.:.:.|
  Rat   501 RKPELILRAEGGLWLRVEP 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ae1NP_525044.1 p450 35..486 CDD:278495 155/496 (31%)
Cyp4f6XP_006241111.1 p450 53..515 CDD:278495 151/472 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348547
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D249473at33208
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.750

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