DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4ae1 and Cyp4a8

DIOPT Version :9

Sequence 1:NP_525044.1 Gene:Cyp4ae1 / 31193 FlyBaseID:FBgn0015036 Length:496 Species:Drosophila melanogaster
Sequence 2:XP_038965258.1 Gene:Cyp4a8 / 266674 RGDID:628846 Length:510 Species:Rattus norvegicus


Alignment Length:508 Identity:151/508 - (29%)
Similarity:255/508 - (50%) Gaps:31/508 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLVVLLVALLVTRLVASLFRLALKELRHPLQGVVPSVSRVPLLGAAW---QMRSFQPDNLHDKFA 62
            :|..|.:|.::|.|:. ||:.|...|..  :.::.:..:.|...:.|   ...||..|.......
  Rat    15 ILGFLQIATVLTVLLL-LFKTAQFYLHR--RWLLRATQQFPSPPSHWFFGHKLSFLVDQEFQDIL 76

  Fly    63 EYVKRFGRSFMGTVLGHVVMVTA-EPRHIDALLQGQHQLKKGTMYFALRGWLGDGLLLSRGKEWH 126
            ..||.|..:....:.|..|.:.. :|.::..:| |:...|....|..|..|:|.||||..|:.|.
  Rat    77 TRVKNFPSACPQWLWGSNVRIQVYDPDYMKLIL-GRSDPKSHHSYRFLAPWIGYGLLLLNGQTWF 140

  Fly   127 TMRKIITPTFHFSILEQFVEVFDRQSSILVERLRTLSYGNEVVNIYPLVGLAALDIITETAM--- 188
            ..|:::||.||:..|:.:|.:......|::::...:...:..:.|:..:.|..||.|.:.|.   
  Rat   141 QHRRMLTPAFHYDTLKPYVGIMADSVRIMLDKWEQIVGQDSTLEIFQHITLMTLDTIMKCAFSQE 205

  Fly   189 -GVNVDAQGADSEVVHAVKDLTNILATRFMRPHLLFPH---LFRLCWPSGFRKQQAGVICLHEFT 249
             .|.:|.:  ....:.||:||.|:   .|.|...:|..   ::.|  .|..||.::.....||.|
  Rat   206 GSVQLDRK--YKSYIKAVEDLNNL---SFFRIRNIFHQNDIIYSL--SSNGRKARSAWQLAHEHT 263

  Fly   250 NGIIEQRRRLLAREANQDKPTKPHAL--LDTLLRATVD-GQPLTDKQIRDEVNTFIFEGHDTTTS 311
            :.:|:.|:..|..|....|..:...|  ||.||.|.:: |..|:||.:|.||:||:|||||||.|
  Rat   264 DQVIKSRKAQLQDEEELQKVKQKRRLDFLDILLFARIENGSSLSDKDLRAEVDTFMFEGHDTTAS 328

  Fly   312 AVSFCLYLLSRHEAVQQKLFEELRMHYGQDLFRGVILSDFATLPYLSCVVKESLRLYPPIPAVAR 376
            .:|:..|.|:.:...||...:|::...|..  ..:...|...:||.:..:||:||:|||:.||:|
  Rat   329 GISWIFYALATNPEHQQGCRKEIQSLLGDG--ASITWDDLDKMPYTTMCIKEALRIYPPVTAVSR 391

  Fly   377 CLEKDLVIDEG-YIPVGTNVVVLLWQLLRDEAIFTDPLVFQPERHLGEEAPRLSPYSYIPFSAGP 440
            .|...:...:| .:|.|..|::..:.|..:..::.:|.||.|.| ...|:.|.| :|::|||.|.
  Rat   392 MLSTPVTFPDGRSLPKGITVMLSFYGLHHNPTVWPNPEVFDPYR-FAPESSRHS-HSFLPFSGGA 454

  Fly   441 RNCIGQKFALLEMKTMVTKVIRHYQLLPMGADVE-PSIKIVLRSKSGVNVGLR 492
            |||||::||:.|:|..|...:..::|||....:. |..::||:||:|:.:.|:
  Rat   455 RNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPIPIPRLVLKSKNGIYLRLK 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ae1NP_525044.1 p450 35..486 CDD:278495 140/466 (30%)
Cyp4a8XP_038965258.1 CYP4B-like 72..505 CDD:410771 136/444 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348485
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.740

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