DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4ae1 and Cyp4b1

DIOPT Version :10

Sequence 1:NP_525044.1 Gene:Cyp4ae1 / 31193 FlyBaseID:FBgn0015036 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_058695.2 Gene:Cyp4b1 / 24307 RGDID:2480 Length:511 Species:Rattus norvegicus


Alignment Length:514 Identity:165/514 - (32%)
Similarity:267/514 - (51%) Gaps:50/514 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LVVLLVALLVTRLVASLFRLALKELRHPLQGVVPSVSRVP---LLGAAWQMRSFQPDNLHDKFAE 63
            :|:|:|      :|..||.|.|:  |..|...:.|....|   |.|.|.:::..   ...||...
  Rat    19 VVILMV------IVLKLFSLLLR--RQKLARAMDSFPGPPTHWLFGHALEIQKL---GSLDKVVS 72

  Fly    64 YVKRFGRS---FMGTVLGHVVMVTAEPRHIDALLQGQHQLKKGTMYFALRGWLGDGLLLSRGKEW 125
            :.::|..:   :.|..:|.:.:.  ||.:..| :..:...|...:|.....|:|.|||:..|.:|
  Rat    73 WAQQFPHAHPLWFGQFVGFLNIY--EPDYAKA-VYSRGDPKAADVYDFFLQWIGKGLLVLDGPKW 134

  Fly   126 HTMRKIITPTFHFSILEQFVEVFDRQSSILVERLRTLSYGNEVVNIYPLVGLAALDIITETAMGV 190
            ...||::||.||:.:|:.:|.:|...:.:::::....:..|:..:|:..||..|||.:.:...|.
  Rat   135 FQHRKLLTPGFHYDVLKPYVAIFAESTRMMLDKWEKKASENKSFDIFCDVGHMALDTLMKCTFGK 199

  Fly   191 NVDAQG-ADSEVVHAVKDLTNILATRF--MRPHLLFPHLFRLCW--PSGFRKQQAGVICLHEFTN 250
            .....| .|:....||.|||.::..|.  .:.|..|     :.|  |.|.|..:|..|. |:.|:
  Rat   200 GDSGLGHRDNSYYLAVSDLTLLMQQRIDSFQYHNDF-----IYWLTPHGRRFLRACKIA-HDHTD 258

  Fly   251 GIIEQRRRLLAREANQDKPTKPHAL--LDTLLRATVD-GQPLTDKQIRDEVNTFIFEGHDTTTSA 312
            .:|.||:..|..|..:.|..:...|  ||.||....: |..|:|.::|.||:||:|||||||||.
  Rat   259 EVIRQRKAALQDEKERKKIQQRRHLDFLDILLGVRDESGIKLSDAELRAEVDTFMFEGHDTTTSG 323

  Fly   313 VSFCLYLLSRHEAVQQKLFEELRMHYG-QDLFRGVILSDFATLPYLSCVVKESLRLYPPIPAVAR 376
            :|:.||.::.:...||...||:|...| ||.|:   ..|.|.:.||:..:||..|||||:|.|.|
  Rat   324 ISWFLYCMALYPEHQQLCREEVRGILGDQDSFQ---WDDLAKMTYLTMCMKECFRLYPPVPQVYR 385

  Fly   377 CLEKDLV-IDEGYIPVGTNVVVLLWQLLRDEAIFTDPLVFQPERHLGEEAPRLSPYSYIPFSAGP 440
            .|.|.:. :|...:|.|:.:.:.::.|.|:..::.||.||.|.|...|.|....|::::||||||
  Rat   386 QLNKPVTFVDGRSLPAGSLISLHIYALHRNSTVWPDPEVFDPLRFSPENAAGRHPFAFMPFSAGP 450

  Fly   441 RNCIGQKFALLEMKTMVTKVIRHYQLLPMGADVEPS---IKI---VLRSKSGVNVGLRP 493
            ||||||:||:.|||.:....:..::.     .::||   ||:   :||||:|:::.|:|
  Rat   451 RNCIGQQFAMNEMKVVTALCLLRFEF-----SLDPSKMPIKVPQLILRSKNGIHLYLKP 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ae1NP_525044.1 CYP4 76..489 CDD:410721 144/428 (34%)
Cyp4b1NP_058695.2 CYP4B-like 67..501 CDD:410771 148/450 (33%)

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