DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d2 and CYP86C4

DIOPT Version :9

Sequence 1:NP_001284806.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_172774.1 Gene:CYP86C4 / 837873 AraportID:AT1G13150 Length:529 Species:Arabidopsis thaliana


Alignment Length:548 Identity:135/548 - (24%)
Similarity:233/548 - (42%) Gaps:104/548 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLVAFATLLLWDFLWRRRGNGILPGPRPLPFLGNLLMYRGLDPEQIMDFVKKNQRKYGR--LYR- 70
            ||..|....|.:.|..:|      ||...|..|..|.: ......:..:|.::.:|...  ||| 
plant    20 LLGLFVFCCLREKLTNKR------GPMLWPVFGITLEF-FFHINDVYGWVTRSLKKCRGTFLYRG 77

  Fly    71 VWILHQLAVFSTDPRDIEFVLSSQ-QHITKNNLYK-LLNCWLGDGLLMSTGRKWHGRRKIITPTF 133
            ||:.......:..|.::|::|.:. ::..|...:| ..|..|.:|:..:....|..:|:||....
plant    78 VWLDGSYGAVTCVPANVEYMLKTNFKNFPKGTFFKSRFNDLLEEGIFNADDDSWKEQRRIIITEM 142

  Fly   134 H--------------------FKILEQFV---EIFDQQSAVMVEQLQSRADGMTPINIFPVICLT 175
            |                    .|::|.|.   |.||.|...:         .:|    |.:|||.
plant   143 HSTGFVEHSFQTTQHLVRKKLLKVMESFAKSQEAFDLQDVFL---------RLT----FDIICLA 194

  Fly   176 ALDIIAETAMGTKINAQKNPNLPYVQAVNDVTNILIKRFI---HAWQRVDWIFRLTQPTEAKRQD 237
            .|....||.      |...|.:|:.:|..:.|...:.||:   ..|:.:    |.......|...
plant   195 GLGADPETL------AVDLPQVPFAKAFEEATESTLFRFMIPPFIWKPM----RFLDTGYEKGLR 249

  Fly   238 KAIKVMHDFTENIIRER------RETLVNNSKETTPEEEVNFLGQKRRMALLDVLLQSTIDGAPL 296
            .|:.|:|.|.:.:|.:|      .|||.|.|...:  ..:.....||         ::.||  |.
plant   250 IAVGVVHGFVDKMIVDRICELKEEETLDNRSDVLS--RIIQIESHKR---------ENEID--PS 301

  Fly   297 SDEDIREEVDTFMFEGHDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPV-------T 354
            :....|:...:|:..|.||::.|:|:..:.|.:||||:.::..|||::|.:...||.       |
plant   302 TIRFFRQFCTSFILAGRDTSSVALSWFCWVIQKHPEVENKIICEIREILRQRGDSPTSKNESLFT 366

  Fly   355 LRDLGELKFMENVIKESLRLHPPVPM-IGRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYFES 418
            :::|..:.:::..:.|:|||.||:|| :.:...:||...|..:..|:.....|:.:.|....:..
plant   367 VKELNNMVYLQAALSETLRLFPPIPMEMKQAIEDDVLPDGTFVRKGSRVYFSIYAMGRMESIWGK 431

  Fly   419 PDE-FRPER------FDADVPQIHPYAYIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHFELLPLG 476
            ..| |||||      |.:|    ..:.|:.|:||||.|||:.||.|:||...:.:|..:.:..:.
plant   432 DCEIFRPERWIQAGKFVSD----DQFKYVVFNAGPRLCIGKTFAYLQMKMIAASVLLRYSIKVVQ 492

  Fly   477 PE---PRHSMNIVLRSANGVHLGLKPRA 501
            ..   ||.:.|:.::  .|:.:.:.||:
plant   493 DHVIAPRVTTNLYMK--YGLKVTITPRS 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_001284806.1 p450 32..495 CDD:278495 127/517 (25%)
CYP86C4NP_172774.1 CYP86A 73..510 CDD:410687 119/478 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 151 1.000 Domainoid score I1385
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8393
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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