DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d2 and cyp26b1

DIOPT Version :10

Sequence 1:NP_525043.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001072655.1 Gene:cyp26b1 / 780112 XenbaseID:XB-GENE-991500 Length:511 Species:Xenopus tropicalis


Alignment Length:504 Identity:119/504 - (23%)
Similarity:211/504 - (41%) Gaps:92/504 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VVGVLLLVAFATLLLWDFLW--RRRGNGILPGPR---PLPFLGNLL--MYRGLDPEQIMDFVKKN 61
            :|.|.||:| .:..||...|  .|..:..||.|:   ..|.:|...  :.:|      .||....
 Frog    19 LVSVALLLA-VSQQLWQLRWAATRDKSCKLPIPKGSMGFPLVGETFHWILQG------SDFQSSR 76

  Fly    62 QRKYGRLYRVWILHQLAVFSTDPRDIEFVLSSQQHITKNNLYKLLNCWLG-DGLLMSTGRKWHGR 125
            :.|||.:::..:|.:..:..|...::..:|..:.|:......:.....|| :.|..|.|.....:
 Frog    77 REKYGNVFKTHLLGRPLIRVTGAENVRKILMGEHHLVSTEWPRSTRMLLGPNSLANSIGDIHRHK 141

  Fly   126 RKIITPTFHFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICLTALDIIAETAMGTKIN 190
            ||:.:..|..:.||.::   .:...|:.:.|:..:.....||::   |                .
 Frog   142 RKVFSKIFSHEALESYL---PKIQLVIQDTLRVWSSNPESINVY---C----------------E 184

  Fly   191 AQKNPNLPYVQAVNDVTNILIKRFIHAWQRVDWIFRLTQPTEAKRQDKAIKVMHDFTENIIR--- 252
            |||   |.:..|:                ||...|||:.    :...:..:|...|.||:..   
 Frog   185 AQK---LTFRMAI----------------RVLLGFRLSD----EELSQLFQVFQQFVENVFSLPV 226

  Fly   253 -----------ERRETLVNNSKETTPEEEVNFLGQKRRMALLDVLLQSTID-GAPLSDEDIREEV 305
                       ..||.|:.:.::...|:..|..|:....| ||:|::|..: |..|:.:::::..
 Frog   227 DVPFSGYRRGIRAREMLLKSLEKAIQEKLQNTQGKDYADA-LDILIESGKEHGKELTMQELKDGT 290

  Fly   306 DTFMFEGHDTTTSAISFCLYEISRHPEVQQRLQQEIR--DVL--GEDRKSPVTLRDLGELKFMEN 366
            ...:|..:.||.||.:..:.::.:||.|.::|::|:|  .:|  |...:..:.:..:..|.:::.
 Frog   291 LELIFAAYATTASASTSLIMQLLKHPSVLEKLREELRGNSILHNGCVCEGALRVETISSLHYLDC 355

  Fly   367 VIKESLRLHPPVPMIGRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPE----YFESPDEFRPERF 427
            ||||.|||..||....|...:..|:.|..||.|    ..:...:||..    .|:..|.|.|:||
 Frog   356 VIKEILRLFSPVSGGYRTVLQTFELDGFQIPKG----WSVLYSIRDTHDTAPVFKDVDVFDPDRF 416

  Fly   428 DADVPQIHP--YAYIPFSAGPRNCIGQKFAMLEMKSTVSKL--LRHFEL 472
            ..|..:...  :.|:||..|.|||:|:..|.|.:|....:|  :..|||
 Frog   417 GQDRTEDKDGRFHYLPFGGGVRNCLGKHLAKLFLKVLAIELASMSRFEL 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_525043.1 CYP4 66..495 CDD:410721 100/435 (23%)
cyp26b1NP_001072655.1 CYP26B1 60..489 CDD:410730 106/462 (23%)

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