DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d2 and cyp46a1.3

DIOPT Version :9

Sequence 1:NP_001284806.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001038763.1 Gene:cyp46a1.3 / 692332 ZFINID:ZDB-GENE-060519-40 Length:491 Species:Danio rerio


Alignment Length:484 Identity:128/484 - (26%)
Similarity:222/484 - (45%) Gaps:89/484 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LPG-PRPLPFLGNLLMYRGLDPEQIMDFVKKNQR-----------KYGRLYRVWILHQLAVFSTD 83
            :|| ||....||::         ..::.|.|::|           |||.:||:...|.:.:....
Zfish    38 IPGPPRDNFLLGHI---------PTINRVTKSERHMNDLLLIWAEKYGPVYRLNSFHYVIINVHC 93

  Fly    84 PRDIEFVLSSQQHITKNNLYKLL-----NCWLGDGLLMSTGRK-WHGRRKIITPTFHFKILEQFV 142
            |...:.::.|.:::....:||.|     ..:||.||:.:|... |:.:|:|:.|.|....|...:
Zfish    94 PEATKTIMMSPKYLKDPFIYKRLFGLFGKRFLGYGLVTATDHDIWYRQRRIMDPAFSSSYLRGLI 158

  Fly   143 EIFDQQSAVMVEQLQSRADGMTPINIFPVICLTALDIIAETAMGTKINAQKNPNLPYVQAVN--- 204
            ..|::.|..::::|:..|...||..:..::....||||.:.|.|..:|..|..:.|:.||:.   
Zfish   159 STFNEMSERLMDKLEEMAINKTPAVMHDLVNCVTLDIICKVAFGVDLNLFKQTDNPFQQAIEQCL 223

  Fly   205 -----DVTNILIKRFIHAWQRVD------WIFRLTQPTEAKRQDKAIK----VMHDFTENIIRER 254
                 |:.:...|.|...|:.:.      .:.|.|.....:.:..|::    |.:|....|::..
Zfish   224 QGMVLDLRDPFCKFFPKNWKAIQETKGATVLLRKTGEQWIQNRKTAVEIGEDVPNDILTQILKTA 288

  Fly   255 RETLVNNSKETTPEEEVNFLGQKRRMALLDVLLQSTIDGAPLSDEDIREEVDTFMFEGHDTTTSA 319
            :|..|||:|:                                 .|.:.:...||...|.:||.:.
Zfish   289 KEEKVNNTKD---------------------------------HEQMLDNFVTFFIAGQETTANQ 320

  Fly   320 ISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRDLGELKFMENVIKESLRLHPPVPMIGRW 384
            :||.:.|:.||||:.:|.:.|:.:|||  .|..::..|||:..::..|:||:|||:|..|...||
Zfish   321 LSFAIMELGRHPEIYKRAKAEVDEVLG--TKRDISYEDLGKFTYLSQVLKETLRLYPTAPGTNRW 383

  Fly   385 FAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYFESPDEFRPERFDADVPQIHPYAYIPFSAGPRNC 449
            ..||:.|.|..||.|.:.....:|..|..::|:.|.:|.||||:.:.|:.: |.|.|||.|||:|
Zfish   384 LHEDMVINGIKIPGGISVIFSSYVAQRLEKHFKDPLKFDPERFNVNAPKPY-YCYYPFSLGPRSC 447

  Fly   450 IGQKF--------AMLEMKSTVSKLLRHF 470
            :||.|        |:.::.:.:..|..||
Zfish   448 LGQVFSQATPAEGALAQLLTQLLTLCSHF 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_001284806.1 p450 32..495 CDD:278495 128/483 (27%)
cyp46a1.3NP_001038763.1 p450 39..452 CDD:278495 123/457 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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