DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d2 and Cyp4f37

DIOPT Version :9

Sequence 1:NP_001284806.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_038935973.1 Gene:Cyp4f37 / 691312 RGDID:1585102 Length:526 Species:Rattus norvegicus


Alignment Length:505 Identity:168/505 - (33%)
Similarity:270/505 - (53%) Gaps:21/505 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLGVVGVLLLVAFATLLLWDFLWRRRGNGI--LP-GPRPLPFLGNLLMYRGLDPEQIMDFVKKNQ 62
            :||....:|    |.:|.|.:.:....:.:  .| .|:...|||:|.:.:  ..|:.|..|.:..
  Rat    23 LLGAASWIL----ARILAWTYSFCENCSRLRCFPQSPKRNWFLGHLGVIQ--SNEEGMQLVTEMG 81

  Fly    63 RKYGRLYRVWILHQLAVFS-TDPRDIEFVLSSQQHITKNN--LYKLLNCWLGDGLLMSTGRKWHG 124
            :.:..::.:|:.....|.. .||..:..:|.:...:...:  ....|..||||||.:|:|.||..
  Rat    82 QTFRDVHLIWLGPVSPVLRLVDPAFVAPLLQAPALVAPKDPTFLHFLKPWLGDGLFLSSGDKWSR 146

  Fly   125 RRKIITPTFHFKILEQFVEIFDQQSAVMVEQLQSRA-DGMTPINIFPVICLTALDIIAETAMGTK 188
            .|:::||.|||.||:.:|:.|:|...:|..:.:... :|...:.:|..|.|..||.:.:...|..
  Rat   147 HRRLLTPAFHFDILKPYVKTFNQSVNIMHAKWKHLCLEGSARLEMFENISLMTLDSLQKCLFGFD 211

  Fly   189 INAQKNPNLPYVQAVNDVTNILIKRFIHAWQRVDWIFRLTQPTEAKRQDKAIKVMHDFTENIIRE 253
            .|.|::|: .|:.|..:::::..||....:..:|:::..|  .:.:|..||..::|.||:.:|||
  Rat   212 SNCQESPS-EYISATLELSSLTRKRSYKLFLYLDFLYYRT--ADGQRFRKACDLVHSFTDAVIRE 273

  Fly   254 RRETLVNNSKETTPEEEVNFLGQKRRMALLDVLLQSTID-GAPLSDEDIREEVDTFMFEGHDTTT 317
            ||..|.:...:...|.:..  .:.:.:..:||||.:..: |..|||||||.|.|||||.|||||.
  Rat   274 RRRLLSSQGVDEFLESKTK--SKSKTLDFIDVLLLAKDEHGKELSDEDIRAEADTFMFGGHDTTA 336

  Fly   318 SAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRDLGELKFMENVIKESLRLHPPVPMIG 382
            ||:|:.||.::.|||.|:|.:||:.::|.:.....:...||.:|.|:...||||||||||...:.
  Rat   337 SALSWILYNLASHPEYQERCRQEVWELLRDREPEEIEWDDLAQLPFLTMCIKESLRLHPPAVDLL 401

  Fly   383 RWFAEDVEI-RGKHIPAGTNFTMGIFVLLRDPEYFESPDEFRPERFDADVPQIH-PYAYIPFSAG 445
            |...:|:.: .|:.||.|....:.||.:..:|..:..|:.:.|.|||.:..|.. |.::||||||
  Rat   402 RRCTQDIVLPDGRVIPKGNICVISIFGIHHNPSVWPDPEVYDPFRFDPENRQKRSPLSFIPFSAG 466

  Fly   446 PRNCIGQKFAMLEMKSTVSKLLRHFELLPLGPEPRHSMNIVLRSANGVHL 495
            |||||||.|||.|:|..|...|..|..||...|||....::||:..|:.|
  Rat   467 PRNCIGQTFAMNEVKVAVGLTLLRFRFLPDDKEPRRKPELILRAEGGLWL 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_001284806.1 p450 32..495 CDD:278495 161/470 (34%)
Cyp4f37XP_038935973.1 CYP4F 74..517 CDD:410772 155/448 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348540
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

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