DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d2 and cyp46a1.3

DIOPT Version :9

Sequence 1:NP_001284806.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001027517.1 Gene:cyp46a1.3 / 613109 XenbaseID:XB-GENE-969052 Length:504 Species:Xenopus tropicalis


Alignment Length:553 Identity:147/553 - (26%)
Similarity:266/553 - (48%) Gaps:115/553 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VGVLLLVAFATLLL---------------------WDFLWRRRGNGILPG-PRPLPFLG------ 41
            :|:..|:.:|.|||                     :|.         :|| ||...|||      
 Frog     1 MGLWALIGWAALLLLALILICFLLFSGYIHYIHMKYDH---------IPGPPRDSFFLGHSPTML 56

  Fly    42 -----NLLMYRGLDPEQIMDFVKKNQRKYGRLYRVWILHQLAVFSTDPRDIEFVLSSQQHITKNN 101
                 |||||     :..:.:|    :|||.:.|:..||::.:....|..::.:|.|.:: :|:.
 Frog    57 RLMKNNLLMY-----DHFLGWV----QKYGPVVRINGLHRVIILVVSPEAVKELLMSPKY-SKDK 111

  Fly   102 LYKLL-NC----WLGDGLLMSTGR---KWHGRRKIITPTFHFKILEQFVEIFDQQSAVMVEQLQS 158
            .|.:: |.    ::|.||:  |.|   .||.:|:|:.|.|....|...:..|::::..::|:|..
 Frog   112 FYDVIANMFGVRFMGKGLV--TDRDYDHWHKQRRIMDPAFSRTYLMGLMGPFNEKAEELMEKLME 174

  Fly   159 RADGMTPINIFPVICLTALDIIAETAMGTKINAQKNPNLPYVQAVN-------DVTNILIKRFIH 216
            :|||...|.:..::....||:|.:.|.|.::|:..:...|:.:|::       ::.|.:::    
 Frog   175 KADGKCEIKMHDMLSRLTLDVIGKVAFGMELNSLNDDLTPFPKAISLVMKGIVEMRNPMVR---- 235

  Fly   217 AWQRVDWIFRLTQPTEAKRQDKAIKVMHDFTENIIRERRETLVNNSKETTPEEEVNFLGQKRRMA 281
                    :.|.:....::..::|:::....:..| |||:..:.:.:|..               
 Frog   236 --------YSLAKRGFIRKVQESIRLLRQTGKECI-ERRQKQIQDGEEIP--------------- 276

  Fly   282 LLDVLLQSTIDGAPLSD----EDIREEVDTFMFEGHDTTTSAISFCLYEISRHPEVQQRLQQEIR 342
             :|:|.| .:.||.:.:    |.:.:...||...|.:||.:.:||.:.|:.|:||:.::.|.||.
 Frog   277 -VDILTQ-ILKGAAMEEECDPEILLDNFVTFFIAGQETTANQLSFVVMELGRNPEILEKAQAEID 339

  Fly   343 DVLGEDRKSPVTLRDLGELKFMENVIKESLRLHPPVPMIGRWFAEDVEIRGKHIPAGTNFTMGIF 407
            :|:|.  |..:...|||:|:::..|:||:|||:|..|...|...||:.|.|..:|......:..:
 Frog   340 EVIGS--KRDIEYEDLGKLQYLSQVLKETLRLYPTAPGTSRGLTEDMVIDGVKVPENVTIMLNSY 402

  Fly   408 VLLRDPEYFESPDEFRPERFDADVPQIHPYAYIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHFEL 472
            ::.|..:|:..|..|.|:||..|.|:.: |:|.|||.|||:||||.|:.:|.|..::|||:.:|.
 Frog   403 IMGRMEQYYSDPLTFNPDRFSPDAPKPY-YSYFPFSLGPRSCIGQVFSQMEAKVVMAKLLQRYEF 466

  Fly   473 -LPLGPEPRHSMNIV----LRSANGVHLGLKPR 500
             |..|    .|..|:    ||..:||...|:||
 Frog   467 ELAEG----QSFKILDTGTLRPLDGVICRLRPR 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_001284806.1 p450 32..495 CDD:278495 137/498 (28%)
cyp46a1.3NP_001027517.1 p450 40..491 CDD:306555 137/499 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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