DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d2 and cyp3c4

DIOPT Version :10

Sequence 1:NP_525043.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001071016.1 Gene:cyp3c4 / 558541 ZFINID:ZDB-GENE-060929-96 Length:507 Species:Danio rerio


Alignment Length:537 Identity:150/537 - (27%)
Similarity:251/537 - (46%) Gaps:91/537 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLVAFATLLLWDFLWRRR-----GNGILPGPRPLPFLGNLLMY-RGLDPEQIMDFVKKNQRKYGR 67
            |:|...|||....:|..|     |   :|||||.||:|.||.| :||     .:|..:..:|||:
Zfish    13 LVVLVITLLFIYGVWPHRFFIKLG---IPGPRPWPFVGTLLSYAKGL-----CNFDMECAKKYGK 69

  Fly    68 LYRVWILHQLAVFSTDPRDIEFVLSSQQHITKNNLYKLLNCWLG---DGLLMSTGRKWHGRRKII 129
            ::.::......:...|...|:.||..:.:....|..|......|   ||::|....:|...|..:
Zfish    70 VWGIYDGRLPILMVADLEVIKVVLVKECYSNFINRRKRTTGLAGPFSDGIIMVKDERWKRMRSTL 134

  Fly   130 TPTFHFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICLTALDIIAETAMGTKINAQKN 194
            :|.|....|::...|....:...::.:|.: |...|:.|..|:...:||:|..::....|::..|
Zfish   135 SPYFTSGRLKEIFPIAMTHADRFIKNMQKK-DPEQPVKIKEVVAPYSLDVITSSSFSVDIDSINN 198

  Fly   195 PNLPYVQAVNDVTNILIKRFIHAWQRVDWIFRLTQP------------TEAKRQDKAI--KVMHD 245
            |..|:|        |.:|:||.        |.:..|            ...|:....:  |...|
Zfish   199 PEDPFV--------INVKKFIQ--------FNMFNPLLLLILLFPSLAIPLKKMGVTLFSKSAMD 247

  Fly   246 FTENIIRERRETLVNNSKETTPEEEVNFLGQKRRMALLDVLLQSTIDGAPLSDEDIREE-----V 305
            |..:::::.::   :::||:  |..|:|         |.::||:.|....:.|.|..|:     .
Zfish   248 FFYSVLKKIKD---DHNKES--EGRVDF---------LKLMLQNQIPDDQIQDSDTSEQPAKGLT 298

  Fly   306 D--------TFMFEGHDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRDLGELK 362
            |        .|:..|::||::.::|.||.::.:|:..::|.:||......|  :|:|...|..:.
Zfish   299 DHEILSQSLVFILGGYETTSTTLTFLLYNLATNPDCLEKLVEEIDKNFPLD--TPITYDALMRMD 361

  Fly   363 FMENVIKESLRLHPPVPMIGRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYFESPDEFRPERF 427
            ::|..|.||:||.|..|.:.|...:.|.|.|..||.||...:..:||..||:.:|||.|||||||
Zfish   362 YLEMAINESMRLLPTAPRLERSAKKTVVINGLTIPEGTLVGIPTYVLSHDPDIWESPGEFRPERF 426

  Fly   428 DAD-VPQIHPYAYIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHFEL-------LPLGPEPRHSMN 484
            ..: ..:...||:|||..|||||||.::|::.||..|.|||::|.:       :||      .||
Zfish   427 SPENKSEFLQYAFIPFGLGPRNCIGMRYAVMIMKLFVVKLLQNFSVETCKETQIPL------EMN 485

  Fly   485 IVLRSANGVHLGLKPRA 501
            :..:....:.|.|.||:
Zfish   486 VTFQPKVPITLKLIPRS 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_525043.1 CYP4 66..495 CDD:410721 122/466 (26%)
cyp3c4NP_001071016.1 cytochrome_P450 66..497 CDD:477761 124/469 (26%)

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