DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d2 and cyp4b1.2

DIOPT Version :10

Sequence 1:NP_525043.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001017348.1 Gene:cyp4b1.2 / 550102 XenbaseID:XB-GENE-963387 Length:515 Species:Xenopus tropicalis


Alignment Length:509 Identity:178/509 - (34%)
Similarity:279/509 - (54%) Gaps:41/509 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VGVLLLVAFATLLLWDFLW---RRRGNGILPGPRPLP---FLGNLLMYR--GLDPEQIMDFVKKN 61
            |.:|||.|:|       |:   ||....::|.|.| |   ..|::..:|  |.|.:::|.:|   
 Frog    30 VVLLLLKAYA-------LYSRGRRFAAALVPFPGP-PAHWLYGHVNQFRRDGKDLDRLMVWV--- 83

  Fly    62 QRKYGRLYRVWI---LHQLAVFSTDPRDIEFVLSSQQHITKNNLYKLLNCWLGDGLLMSTGRKWH 123
             .||...:.:||   ...|.:  |||...:.|.......|... |..|..|:|.|||:.:|..|.
 Frog    84 -NKYPNAFPLWIGKFFGTLII--TDPDYAKVVFGRSDPKTSTG-YNFLVPWIGKGLLILSGNTWF 144

  Fly   124 GRRKIITPTFHFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICLTALDIIAETAMGTK 188
            ..|::|||.||:.:|:.:|.:....:.:|:::|...::....:.:|..:.|..||.|.:.|....
 Frog   145 QHRRLITPGFHYDVLKPYVSLISDSTKIMLDELDVYSNKDESVELFQHVSLMTLDSIMKCAFSYH 209

  Fly   189 INAQKNPNLPYVQAVNDVTNILIKRFIHAWQRVDWIFRLTQPTEAKRQDKAIKVMHDFTENIIRE 253
            .|.|.:.:..|:|||.|::.:..:|........:.|:.|:  ....|..||.:::|..|:.:|.:
 Frog   210 SNCQTDKDNDYIQAVYDLSWLTQQRIRTFPYHSNLIYFLS--PHGFRFRKACRIVHLHTDKVIGQ 272

  Fly   254 RRETLVNNSKETTPEEEVNFLGQKRRMALLDVLLQSTID-GAPLSDEDIREEVDTFMFEGHDTTT 317
            |::.|.:       :||:..:.:||.:..||:||.|..: |..||.||:|.|||||||||||||:
 Frog   273 RKKLLES-------KEELEKVQKKRHLDFLDILLCSKDENGQGLSHEDLRAEVDTFMFEGHDTTS 330

  Fly   318 SAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRDLGELKFMENVIKESLRLHPPVPMIG 382
            |.||:.||.::.|||.||:.::||.:.|||  :..:...||..:.:....|||||||:||||.:.
 Frog   331 SGISWILYCMATHPEHQQKCREEISEALGE--RQTMEWDDLNRMPYTTMCIKESLRLYPPVPSVS 393

  Fly   383 RWFAEDVEIR-GKHIPAGTNFTMGIFVLLRDPEYFESPDEFRPERFDAD-VPQIHPYAYIPFSAG 445
            |..|:.:... |:.:|||...::.|:.:.|:|..::.|:.|.|.||..: ..:.|.:|::||:||
 Frog   394 RELAKPITFHDGRSLPAGMLVSLQIYAIHRNPNVWKDPEIFDPLRFSPENSSKRHSHAFVPFAAG 458

  Fly   446 PRNCIGQKFAMLEMKSTVSKLLRHFELLP-LGPEPRHSMNIVLRSANGVHLGLK 498
            |||||||.|||.|||..|:..|:.|||.| |...|.....:||||.||:|:.||
 Frog   459 PRNCIGQNFAMNEMKVAVALTLKRFELSPDLSKPPLKQPQLVLRSKNGIHVYLK 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_525043.1 CYP4 66..495 CDD:410721 154/435 (35%)
cyp4b1.2NP_001017348.1 CYP4B-like 76..510 CDD:410771 159/451 (35%)

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