DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d2 and cyp-25A3

DIOPT Version :9

Sequence 1:NP_001284806.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001040850.1 Gene:cyp-25A3 / 4363046 WormBaseID:WBGene00014697 Length:502 Species:Caenorhabditis elegans


Alignment Length:536 Identity:148/536 - (27%)
Similarity:251/536 - (46%) Gaps:87/536 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLVAFATLLLWDFL-----WRRRGNGILPGPRPLPFLGNL--LMYR----GLDPEQIMDFVKKNQ 62
            :||:..:.:::..|     :|.||...|.||.|...:|||  ::.|    |.|..  .|:..|..
 Worm     9 ILVSLVSFIIYVILARKERFRLRGKIGLSGPEPHWLMGNLKQIIERKAKLGYDDS--YDWYNKLH 71

  Fly    63 RKYGRLYRVWILHQLAVFSTDPRDIEFVL---------SSQQHITKNNLYKLLNCWLGDGLLMST 118
            :::|..:.::...||.:..|:..||:.|.         .:...|.::|..|       :.||.:|
 Worm    72 KQFGETFGIYFGTQLNINITNEEDIKEVFIKNFSNFSDRTPPPIIEDNKLK-------ESLLQNT 129

  Fly   119 GRK-WHGRRKIITPTFHFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICLTALDIIAE 182
            ... |...|..|.|.|....::...|....:..:.:|.|:.:|......:|:.......||:|.:
 Worm   130 YESGWKHTRSAIAPIFSTGKMKAMHETIHSKVDLFLEILKEKASSGQKWDIYDDFQGLTLDVIGK 194

  Fly   183 TAMGTKINAQKNPN-LPYVQAVNDVTNILIK--RFIHAWQRVDWIFRLTQPTEAKRQDKAIKVMH 244
            .|.....|.|::.| :.||.|...:|||.|:  :.|    ...::|        ....|..||::
 Worm   195 CAFAIDSNCQRDRNDVFYVNARKFITNIDIRHSKII----STSFLF--------PELSKLWKVLY 247

  Fly   245 DFTENIIRERRETLVNNSKETTPEEEVNFLGQKRR-------MALLDVLLQSTID-GAPLSDEDI 301
            .||:  :.:....||         |.:..:.::||       :.||.:||....| ..|::.:::
 Worm   248 RFTD--LAKAEIPLV---------EGLADVYERRRGGEGSDSVDLLKLLLNREDDKSKPMTKQEV 301

  Fly   302 REEVDTFMFEGHDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRDLGELKFMEN 366
            .|....|:..|::||::|:::|.|.:|::|.|||:|.:||.:.   .....:|...:..:|:::.
 Worm   302 IENCFAFLLAGYETTSTAMTYCSYLLSKYPNVQQKLYEEIMEA---KENGGLTYDSIHNMKYLDY 363

  Fly   367 VIKESLRLHPPV-PMIGRWFAEDVEIRGKHIPAGTNFTMGIFVLL-----RDPEYFESPDEFRPE 425
            |.||:||.:||| ....|...:|:.|||:..|.|     .|.|.|     |:||.::||:||.||
 Worm   364 VYKETLRCYPPVIHFSNRRCLKDITIRGQFYPKG-----AIVVCLPHTVHRNPENWDSPEEFHPE 423

  Fly   426 RFDADVPQIHPYAYIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHFEL------LPLGPEPRHSMN 484
            ||:....:.....:|||..|||.|:|.:||.:|.|:|::|||..|||      ..|.|:   ...
 Worm   424 RFENWEEKSSSLKWIPFGVGPRYCVGMRFAEMEFKTTIAKLLDTFELKQFEGEADLIPD---CNG 485

  Fly   485 IVLRSANGVHLGLKPR 500
            :::|..:.|.|.||||
 Worm   486 VIMRPKDPVRLHLKPR 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_001284806.1 p450 32..495 CDD:278495 136/501 (27%)
cyp-25A3NP_001040850.1 p450 37..496 CDD:278495 136/501 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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