DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d2 and Cyp49a1

DIOPT Version :10

Sequence 1:NP_525043.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_610588.2 Gene:Cyp49a1 / 36105 FlyBaseID:FBgn0033524 Length:589 Species:Drosophila melanogaster


Alignment Length:384 Identity:69/384 - (17%)
Similarity:128/384 - (33%) Gaps:144/384 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   662 LLTQHYNQLLIVDKVW----------SKEQLLAVCDSVTL-EDVQGFAKEMLQA-------FHME 708
            |.|.|.::..::|..|          |::.||.:.|...| |:||.|.....:|       .|..
  Fly   304 LATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFDLRNLSEEVQVFRGHKKEASAVSWHPIHEG 368

  Fly   709 LFVHGNS----------TEKE--AIQLSKE----------LMDVLKSAAPNSRPLYRNEHNPRRE 751
            ||..|.|          |:||  :|.::.:          |..:|.|.:        |:|..:..
  Fly   369 LFSSGGSDGSILFWNVGTDKEVGSIDMAHDSIVWTLAWHPLGHILCSGS--------NDHTVKFW 425

  Fly   752 LQLNNGDEYVYRHLQKTHDVGCVEVTYQIGVQNTYDNAVVGLIDQLIREPAFNTLRTNEALGYIV 816
            .:...||:              :...|.:   ||...::.||.:..:.|             :||
  Fly   426 TRNRPGDQ--------------MRDKYNL---NTLPASLAGLDECELEE-------------HIV 460

  Fly   817 WTGSRLNCGTVALNVIVQGPKSVDHVLERIEVFLESVRKEIAEMPQEEFDNQVSGMIARLEEK-- 879
            ..|              .||:      :::::......||...:|  ..|..::....::.||  
  Fly   461 IPG--------------MGPE------DKVDIVESIATKEAGPIP--GLDLNLNSFNEKMREKKI 503

  Fly   880 --PKTLSSRFRRFWNEIECRQYNFARREEEVALLKTIKKDDVLELFDKKIRKDAAERRK-----L 937
              .|.:...|:..|||       .::.::.     :...|::.|:..:.:.:..|..:|     :
  Fly   504 PYSKPIPRNFQAQWNE-------SSKLDDH-----SSTADEIKEVISQIVDRGPASPKKPLPTAI 556

  Fly   938 AVFVH------GKNEDQ------EAVNTIIKKNAESGKKEKEVLYSDQLRQFLPLYGRP 984
            :::.|      |...:|      ||:|..|:...           ..|||...|....|
  Fly   557 SLYEHMIPVIPGSALEQAISDGTEALNRFIENGG-----------IPQLRDIFPPIDEP 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_525043.1 CYP4 66..495 CDD:410721
Cyp49a1NP_610588.2 CYP24A1-like 138..581 CDD:410677 60/348 (17%)
Blue background indicates that the domain is not in the aligned region.

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