DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d2 and cyp3c1

DIOPT Version :10

Sequence 1:NP_525043.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_997838.1 Gene:cyp3c1 / 324340 ZFINID:ZDB-GENE-030131-3060 Length:505 Species:Danio rerio


Alignment Length:530 Identity:136/530 - (25%)
Similarity:251/530 - (47%) Gaps:79/530 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLVAFATLLLWDFLW-----RRRGNGILPGPRPLPFLGNLLMYRGLDPEQIMDFVKKNQRKYGRL 68
            |:|...||||...:|     ::.|   :||||||||:|..|.|    .:.|.:|..:..:|||::
Zfish    13 LVVLVITLLLIYGVWPHGFFKKLG---IPGPRPLPFVGTALSY----SKGICNFDIECSKKYGKV 70

  Fly    69 YRVWILHQLAVFSTDPRDIEFVLSSQQHITKNNLYKLLNCWLG---DGLLMSTGRKWHGRRKIIT 130
            :.::......:..||...|:.:|....:.|..|...:....:|   ||:.:....:|...|..::
Zfish    71 WGIYDGRLPLLLVTDLEMIKTILVKDCYSTFTNRRNMNPDLVGPFADGITLVKDERWRRIRSSLS 135

  Fly   131 PTFHFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICLTALDIIAETAMGTKINAQKNP 195
            |.|....|::...|....:...::.::.: |...|:.|..|:...:||::|.::.....::..||
Zfish   136 PYFTSGRLKEIFPIAMTHADRFIKNMEKK-DPNLPLKIKDVVAPYSLDVVASSSFSVDFDSINNP 199

  Fly   196 NLPYVQAVN-------------------DVTNILIKRFIHAWQR--VDWIFRLTQPTEAKRQDKA 239
            :.|:|.::.                   ...|:|.|..|..:.|  .|:.::..:..:.:..:..
Zfish   200 DDPFVTSIKSFFNINPLSPLFLLLAFCPSAANLLAKMGISVFSRSTTDFYYKALRKIKDEHNESN 264

  Fly   240 IKVMHDFTENIIRERRETLVNNSKETTPEEEVNFLGQKRRMALLDVLLQSTIDGAPLSDEDIREE 304
            .:|  ||.:.:|:.:           .|:::|.           |...:..:.|  |:|.:|..:
Zfish   265 GRV--DFLKLMIQNQ-----------IPDDQVK-----------DTASEQPVKG--LTDHEILSQ 303

  Fly   305 VDTFMFEGHDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRDLGELKFMENVIK 369
            ...|:..|::||::.:|:.||.::.:|:..::|.:||......|  .|:|...|..:.::|..|.
Zfish   304 SFIFILGGYETTSTTLSYLLYNLATNPDCLEKLVEEIDKNFPLD--IPITYDALMRMDYLEMAIH 366

  Fly   370 ESLRLHPPVPMIGRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYFESPDEFRPERFDAD-VPQ 433
            ||:|:.|..|.:.|...:.|||.|..||..|...:.::||.|||:.:|||:||:||||..: ..:
Zfish   367 ESMRVFPAGPRLERVCKKTVEINGITIPKNTLVGIPLYVLSRDPDLWESPNEFKPERFSPESKTE 431

  Fly   434 IHPYAYIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHFEL-------LPLGPEPRHSMNIVLRSAN 491
            |:..|::||..|||||||.:||::.||..|.|||:.:.:       :|:      .:|...:...
Zfish   432 INQCAFMPFGLGPRNCIGMRFALMMMKLLVVKLLQKYTVETCKETQIPV------QLNFFFQPKV 490

  Fly   492 GVHLGLKPRA 501
            .:.|.|.||:
Zfish   491 PITLKLIPRS 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_525043.1 CYP4 66..495 CDD:410721 109/460 (24%)
cyp3c1NP_997838.1 cytochrome_P450 66..495 CDD:477761 111/463 (24%)

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