DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d2 and Cyp4a3

DIOPT Version :9

Sequence 1:NP_001284806.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_038965516.1 Gene:Cyp4a3 / 298423 RGDID:631356 Length:511 Species:Rattus norvegicus


Alignment Length:487 Identity:165/487 - (33%)
Similarity:254/487 - (52%) Gaps:73/487 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LYRVWILHQLAVFSTDP---------RDIEFVLSSQQHIT------------------------- 98
            |.|.|:|..|..|.:.|         :|.||    ||.:|                         
  Rat    39 LRRQWLLKALEKFPSTPSHWLWGHDLKDREF----QQVLTWVEKFPGACLQWLSGSKTRVLLYDP 99

  Fly    99 -------------KNNLYKLLNCWL----GDGLLMSTGRKWHGRRKIITPTFHFKILEQFVEIFD 146
                         .:.:|:.|..|:    |.|||:..|:||....:::||.||:.||:.:|:|..
  Rat   100 DYVKVVLGRSDPKASGIYQFLAPWIVSGTGYGLLLLNGKKWFQHWRMLTPAFHYGILKPYVKIMA 164

  Fly   147 QQSAVMVEQLQSRADGMTPINIFPVICLTALDIIAETAMGTKINAQKNPN-LPYVQAVNDVTNIL 210
            ...::|:::.:...|...|:.||..:.|..||.:.:.|...:.:.|.:.| ..|.:||.|:.|:.
  Rat   165 DSVSIMLDKWEKLDDQDHPLEIFHYVSLMTLDTVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNLT 229

  Fly   211 IKRFIHAWQRVDWIFRLTQPTEAKRQDKAIKVMHDFTENIIRERRETLVNNSKETTPEEEVNFLG 275
            ..|...|:.....|:.::  ::.:...:|.::.|:.|:.:|:.|:..|.|       |||:....
  Rat   230 FFRVRSAFYGNSIIYNMS--SDGRLSRRACQIAHEHTDGVIKMRKAQLQN-------EEELQKAR 285

  Fly   276 QKRRMALLDVLLQSTI-DGAPLSDEDIREEVDTFMFEGHDTTTSAISFCLYEISRHPEVQQRLQQ 339
            :||.:..||:||.:.: ||..|||||:|.|||||||||||||.|.||:..|.::.|||.|:|.::
  Rat   286 KKRHLDFLDILLFAKMEDGKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCRE 350

  Fly   340 EIRDVLGEDRKSPVTLRDLGELKFMENVIKESLRLHPPVPMIGRWFAEDVEI-RGKHIPAGTNFT 403
            |::.:||:.  :.||...|.::.:....|||:|||:||||.:.|..:..|.. .|:.||.|...|
  Rat   351 EVQSILGDG--TSVTWDHLDQISYTTMCIKEALRLYPPVPSVSRELSSPVTFPDGRSIPKGITTT 413

  Fly   404 MGIFVLLRDPEYFESPDEFRPERFDADVPQIHPYAYIPFSAGPRNCIGQKFAMLEMKSTVSKLLR 468
            :.|:.|..:|.|:.:|..|.|.||..|.|: |.:||:|||.|.|||||::|||.|:|..|:..|.
  Rat   414 ILIYGLHHNPSYWPNPKVFDPSRFSPDSPR-HSHAYLPFSGGARNCIGKQFAMNELKVAVALTLL 477

  Fly   469 HFELLPLGPE--PRHSMNIVLRSANGVHLGLK 498
            .||||| .|.  |.....:||:|.||:||.||
  Rat   478 RFELLP-DPTRIPVPMARLVLKSKNGIHLRLK 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_001284806.1 p450 32..495 CDD:278495 161/482 (33%)
Cyp4a3XP_038965516.1 CYP4B-like 69..506 CDD:410771 153/453 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348460
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.750

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