DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d2 and Cyp4v3

DIOPT Version :10

Sequence 1:NP_525043.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001129072.1 Gene:Cyp4v3 / 266761 RGDID:708530 Length:525 Species:Rattus norvegicus


Alignment Length:542 Identity:214/542 - (39%)
Similarity:316/542 - (58%) Gaps:70/542 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LGVVGVLLL---------VAFATLLLWDFL-----WRRRGNGILPGP---RPLPFLGNLLMYRGL 49
            ||:.|..||         ||.||:|| :.|     :.|:...:.|.|   |..|.:|:.|..:..
  Rat     6 LGLSGQKLLLWGAASAVSVAGATVLL-NILQMLVSYARKWQQMRPIPSVARAYPLVGHALFMKPN 69

  Fly    50 DPE---QIMDFVKKNQRKYGRLYRVWI--LHQLAVFSTDPRDIEFVLSSQQHITKNNLYKLLNCW 109
            :.|   ||:.:.:  :.::..:.::||  :..:|::..:  ::|.:|:|.:.|.|:.:||.|..|
  Rat    70 NTEFFQQIIQYTE--EFRHLPIIKLWIGPVPLVALYKAE--NVEVILTSSKQIDKSFMYKFLQPW 130

  Fly   110 LGDGLLMSTGRKWHGRRKIITPTFHFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICL 174
            ||.|||.|||.||..|||::||:|||.|||.|:::.::|:.::|.:|:...: ....|.|..|.|
  Rat   131 LGLGLLTSTGSKWRARRKMLTPSFHFTILEDFLDVMNEQANILVNKLEKHVN-QEAFNCFFPITL 194

  Fly   175 TALDIIAETAMGTKINAQKNPNLPYVQAVNDVTNILIKRFIHAWQRVD-W--IFRLTQPTEAKRQ 236
            .|||||.|||||..|.||.|.:..||:.|..:::::.:|....|...| |  :|:     |.:..
  Rat   195 CALDIICETAMGKNIGAQSNGDSEYVRTVYRMSDMIYRRMKMPWFWFDLWYLMFK-----EGRDH 254

  Fly   237 DKAIKVMHDFTENIIRERRETLVNNSKETTPEEEVNFLG--------QKRRMALLDVLLQST-ID 292
            .|.:|.:|.||.|:|.||    ||..|     .|.:.:|        :.:|.|.||:||..| .:
  Rat   255 KKGLKSLHTFTNNVIAER----VNARK-----AEQDCIGAGRGPLPSKTKRKAFLDLLLSVTDEE 310

  Fly   293 GAPLSDEDIREEVDTFMFEGHDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRD 357
            |..||.||||||||||||||||||.:||::.||.:..:||||:::.:|:.||.|...: ||||.|
  Rat   311 GNKLSHEDIREEVDTFMFEGHDTTAAAINWSLYLLGSNPEVQRKVDKELDDVFGRSHR-PVTLED 374

  Fly   358 LGELKFMENVIKESLRLHPPVPMIGRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYFESPDEF 422
            |.:||:::.||||:||:.|.||:..|..:||.|:.|..|..||...:..:.|.|||.||..|:||
  Rat   375 LKKLKYLDCVIKETLRVFPSVPLFARSLSEDCEVAGYKISKGTEAVIIPYALHRDPRYFPDPEEF 439

  Fly   423 RPERFDADVPQ-IHPYAYIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHF--------ELLPLGPE 478
            :||||..:..| .|||||:|||||||||||||||::|.|:.::.:||.|        |.|.|..:
  Rat   440 QPERFFPENSQGRHPYAYVPFSAGPRNCIGQKFAVMEEKTILACILREFWIESNQKREELGLAGD 504

  Fly   479 PRHSMNIVLRSANGVHLGLKPR 500
                  ::||..||:.:.||.|
  Rat   505 ------LILRPNNGIWIKLKRR 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_525043.1 CYP4 66..495 CDD:410721 189/451 (42%)
Cyp4v3NP_001129072.1 CYP4V 76..515 CDD:410773 191/464 (41%)

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