DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d2 and Cyp4a8

DIOPT Version :9

Sequence 1:NP_001284806.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_038965258.1 Gene:Cyp4a8 / 266674 RGDID:628846 Length:510 Species:Rattus norvegicus


Alignment Length:520 Identity:165/520 - (31%)
Similarity:272/520 - (52%) Gaps:52/520 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VVGVLLLVAFATLLLWDF---------LWRRRGNGILPGPRPLPFLGNLLMYRGLDPEQIMDFVK 59
            ::|.|.:....|:||..|         .|..|.....|.|....|.|:.|.:  |..::..|.:.
  Rat    15 ILGFLQIATVLTVLLLLFKTAQFYLHRRWLLRATQQFPSPPSHWFFGHKLSF--LVDQEFQDILT 77

  Fly    60 --KN------QRKYGRLYRVWILHQLAVFSTDPRDIEFVLSSQQHITKNNLYKLLNCWLGDGLLM 116
              ||      |..:|...|:.:.        ||..::.:| .:.....::.|:.|..|:|.|||:
  Rat    78 RVKNFPSACPQWLWGSNVRIQVY--------DPDYMKLIL-GRSDPKSHHSYRFLAPWIGYGLLL 133

  Fly   117 STGRKWHGRRKIITPTFHFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICLTALDIIA 181
            ..|:.|...|:::||.||:..|:.:|.|......:|:::.:......:.:.||..|.|..||.|.
  Rat   134 LNGQTWFQHRRMLTPAFHYDTLKPYVGIMADSVRIMLDKWEQIVGQDSTLEIFQHITLMTLDTIM 198

  Fly   182 ETAMGTKINAQKNPNL-PYVQAVNDVTNILIKRFIHAWQRVDWIFRLTQPTEAKRQDKAIKVMHD 245
            :.|...:.:.|.:... .|::||.|:.|:...|..:.:.:.|.|:.|:  :..::...|.::.|:
  Rat   199 KCAFSQEGSVQLDRKYKSYIKAVEDLNNLSFFRIRNIFHQNDIIYSLS--SNGRKARSAWQLAHE 261

  Fly   246 FTENIIRERRETLVNNSKETTPEEEVNFLGQKRRMALLDVLLQSTID-GAPLSDEDIREEVDTFM 309
            .|:.:|:.|:..|.:       |||:..:.||||:..||:||.:.|: |:.|||:|:|.||||||
  Rat   262 HTDQVIKSRKAQLQD-------EEELQKVKQKRRLDFLDILLFARIENGSSLSDKDLRAEVDTFM 319

  Fly   310 FEGHDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRDLGELKFMENVIKESLRL 374
            |||||||.|.||:..|.::.:||.||..::||:.:||:.  :.:|..||.::.:....|||:||:
  Rat   320 FEGHDTTASGISWIFYALATNPEHQQGCRKEIQSLLGDG--ASITWDDLDKMPYTTMCIKEALRI 382

  Fly   375 HPPVPMIGRWFAEDVEI-RGKHIPAGTNFTMGIFVLLRDPEYFESPDEFRPERFDADVPQIHPYA 438
            :|||..:.|..:..|.. .|:.:|.|....:..:.|..:|..:.:|:.|.|.|| |.....|.::
  Rat   383 YPPVTAVSRMLSTPVTFPDGRSLPKGITVMLSFYGLHHNPTVWPNPEVFDPYRF-APESSRHSHS 446

  Fly   439 YIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHFELLPLG-----PEPRHSMNIVLRSANGVHLGLK 498
            ::|||.|.|||||::|||.|:|..|:..|..|||||..     |.||    :||:|.||::|.||
  Rat   447 FLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPIPIPR----LVLKSKNGIYLRLK 507

  Fly   499  498
              Rat   508  507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_001284806.1 p450 32..495 CDD:278495 154/478 (32%)
Cyp4a8XP_038965258.1 CYP4B-like 72..505 CDD:410771 148/457 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348484
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.650

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