DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d2 and Cyp3a23-3a1

DIOPT Version :10

Sequence 1:NP_525043.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_037237.2 Gene:Cyp3a23-3a1 / 25642 RGDID:628626 Length:502 Species:Rattus norvegicus


Alignment Length:506 Identity:142/506 - (28%)
Similarity:249/506 - (49%) Gaps:92/506 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLVAFATLLLWDF------LWRRRGNGILPGPRPLPFLGNLL-MYRGLDPEQIMDFVKKNQRKYG 66
            :|:|...:||:.|      |::::|   :|||:||||.|.:| .|.||     ..|..:..:|||
  Rat    13 VLLAVVLVLLYGFGTRTHGLFKKQG---IPGPKPLPFFGTVLNYYMGL-----WKFDVECHKKYG 69

  Fly    67 RLYRVWILH--QLAVFSTDPRDIEFVLSSQQHITKNNLYKLLNCW--------------LGDGLL 115
               ::|.|.  |:.:|:.  .|.|.:        ||.|.|  .|:              :|..:.
  Rat    70 ---KIWGLFDGQMPLFAI--TDTEMI--------KNVLVK--ECFSVFTNRRDFGPVGIMGKAIS 119

  Fly   116 MSTGRKWHGRRKIITPTFHFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICLTALDII 180
            :|...:|...|.:::|||....|::...:.:|...::|:.|  |.:...|:.:..|....::|:|
  Rat   120 VSKDEEWKRYRALLSPTFTSGRLKEMFPVIEQYGDILVKYL--RQEKGKPVPVKEVFGAYSMDVI 182

  Fly   181 AETAMGTKINAQKNPNLPYVQAVNDVTNILIKRFIHAWQRVDW---------IFRLTQPT-EAKR 235
            ..|:.|..:::..||..|:|:..        |:.:    |:|:         :|....|. |...
  Rat   183 TSTSFGVNVDSLNNPKDPFVEKA--------KKLL----RIDFFDPLFLSVVLFPFLTPVYEMLN 235

  Fly   236 QDKAIKVMHDFTENIIRERRETLVNNSKETTPEEEVNFLGQKRRMALLDVLLQSTIDG------A 294
            .....|...:|.:..:...:||.:::.             ||.|:..|.:::.:..|.      .
  Rat   236 ICMFPKDSIEFFKKFVYRMKETRLDSV-------------QKHRVDFLQLMMNAHNDSKDKESHT 287

  Fly   295 PLSDEDIREEVDTFMFEGHDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRDLG 359
            .|||.:|..:...|:|.|::.|:|.:||.|:.::.||:.|::||:||...|  ..|:|.|...:.
  Rat   288 ALSDMEITAQSIIFIFAGYEPTSSTLSFVLHSLATHPDTQKKLQEEIDRAL--PNKAPPTYDTVM 350

  Fly   360 ELKFMENVIKESLRLHPPVPMIGRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYFESPDEFRP 424
            |:::::.|:.|:|||:|....:.|...:||||.|..:|.|:...:..:.|.|||:::..|:||||
  Rat   351 EMEYLDMVLNETLRLYPIGNRLERVCKKDVEINGVFMPKGSVVMIPSYALHRDPQHWPEPEEFRP 415

  Fly   425 ERFDAD-VPQIHPYAYIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHFELLP 474
            |||..: ...|.||.|:||..|||||||.:||::.||..::|:|::|...|
  Rat   416 ERFSKENKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSFQP 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_525043.1 CYP4 66..495 CDD:410721 120/442 (27%)
Cyp3a23-3a1NP_037237.2 CYP3A 67..491 CDD:410743 122/444 (27%)

Return to query results.
Submit another query.