DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d2 and Cyp3a18

DIOPT Version :9

Sequence 1:NP_001284806.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_665725.2 Gene:Cyp3a18 / 252931 RGDID:628709 Length:497 Species:Rattus norvegicus


Alignment Length:500 Identity:140/500 - (28%)
Similarity:244/500 - (48%) Gaps:81/500 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VAFATLLLWDFLWRRRGNGI-----LPGPRPLPFLGNLLMYRGLDPEQIMDFVKKNQRKYGRLYR 70
            |..||.|:..:::....:|:     :|||:|:|..|.:..|    .:.:..|.....:|||   :
  Rat    13 VLLATSLMLFYIYGTYSHGLFKKLGIPGPKPVPLFGTIFNY----GDGMWKFDDDCYKKYG---K 70

  Fly    71 VWILHQ-----LAVFSTDPRDIEFVLSSQQHITKNNLYKLLNC-----WLGDGLLMSTGRKWHGR 125
            :|..::     ||:.  ||..|:.||..:.:    :::....|     ::...:.||...:|...
  Rat    71 IWGFYEGPQPFLAIM--DPEIIKMVLVKECY----SVFTNRRCFGPMGFMKKAITMSEDEEWKRL 129

  Fly   126 RKIITPTFHFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICLTALDIIAETAMGTKIN 190
            |.|::|||....|::...:..|....:::.|:.......|||:..:....::|:|..|:.|..::
  Rat   130 RTILSPTFTSGKLKEMFPLMRQYGDTLLKNLRREEAKGEPINMKDIFGAYSMDVITGTSFGVNVD 194

  Fly   191 AQKNPNLPYVQAVNDV----------TNILIKRFIHAWQRVDWIFRLTQPTEAKRQDKAIKVMHD 245
            :..||..|:||....:          .::::..|:..      |:.:...:...||         
  Rat   195 SLNNPQDPFVQKAKKILKFQIFDPFLLSVVLFPFLTP------IYEMLNFSIFPRQ--------- 244

  Fly   246 FTENIIRERRETLVNNSKETTPEEEVNFL----------GQKRRMALLDVLLQSTIDGAPLSDED 300
             :.|..::..:|:..|..::..:..|:||          ||:.:.|              |||.:
  Rat   245 -SMNFFKKFVKTMKKNRLDSNQKSRVDFLQLMMNTQNSKGQESQKA--------------LSDLE 294

  Fly   301 IREEVDTFMFEGHDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRDLGELKFME 365
            :..:...|:|.|:|.|:::|||.:||::..|.||::||.||...|  ..|:|||...|.|:::::
  Rat   295 MAAQAIIFIFGGYDATSTSISFIMYELATRPNVQKKLQNEIDRAL--PNKAPVTYDALMEMEYLD 357

  Fly   366 NVIKESLRLHPPVPMIGRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYFESPDEFRPERFDAD 430
            .|:.|||||:|....:.|...:||||.|..||.||..|:.|:.|.|:|||:..|:||.||||..:
  Rat   358 MVVNESLRLYPIATRLDRVSKKDVEINGVFIPKGTVVTIPIYPLHRNPEYWLEPEEFNPERFSKE 422

  Fly   431 -VPQIHPYAYIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHFELLP 474
             ...|.||.|:||..|||||||.:||::.||..|..:|::|.:.|
  Rat   423 NKGSIDPYVYLPFGNGPRNCIGMRFALISMKLAVIGVLQNFNIQP 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_001284806.1 p450 32..495 CDD:278495 134/473 (28%)
Cyp3a18NP_665725.2 CYP3A 67..492 CDD:410743 126/441 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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