DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d2 and cyp-34A1

DIOPT Version :9

Sequence 1:NP_001284806.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_506787.1 Gene:cyp-34A1 / 188399 WormBaseID:WBGene00011698 Length:504 Species:Caenorhabditis elegans


Alignment Length:547 Identity:121/547 - (22%)
Similarity:213/547 - (38%) Gaps:145/547 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VLLLVAFATLLLWDFLWRRRGNGILP-GPRPLPFLGNLLMYRGLDPEQIMDFVKKN--------- 61
            |||.....:|.| ...||.|..  || ||.|||.:|||        .|::.:..||         
 Worm     4 VLLFFTIISLAL-AHQWRARKQ--LPRGPYPLPLIGNL--------HQLLYYCWKNGGLVEGYAE 57

  Fly    62 -QRKYGRLYRVWILHQLAVFSTDPRDIEFVLSSQQHITK--------------NNLYKLLNCWLG 111
             |:.:|::|.:||.....||..|     |.::.:.|:.:              .|.|:       
 Worm    58 IQKSFGKVYTLWIGPLPTVFIAD-----FEVAHETHVKRAHEFGTRYAPGLMNYNRYE------- 110

  Fly   112 DGLLMSTGRKWHGRRKIITPTF-HF----KILEQFVEIFDQQSAVMVEQLQSRADGMTPIN---- 167
            .|::.|.|..:....:.:..|| :|    .|:|:.:          :::.:.|.:.....|    
 Worm   111 RGVVASNGEFFQEHSRFVLSTFRNFASGRNIMEERI----------MDEYRYRFEDFASSNGICN 165

  Fly   168 ----IFPVICLTALDIIAETAMG-TKINAQKNPNLPYVQAVNDVTNILIKRFIHAWQRVDW--IF 225
                ||........|::..:.:. ..||.:...|.|..:.       |:.|....::...:  ||
 Worm   166 KERKIFETWARPFFDLLTGSVINKILINERFEQNDPEFEK-------LVSRLAKGFENTGFLDIF 223

  Fly   226 RLTQPTEAKRQDKAIKVMHDFTENIIRERRETLVNNSKETTPEEEVNFLGQKRRMALLDVLLQST 290
            ...:..|::               .::.|::|:.         |..|::.:..:.::...:.|..
 Worm   224 CPVRILESR---------------FLKWRQDTIF---------EPFNYILELNKKSIARRVAQLK 264

  Fly   291 IDGAPLSDE--------------DIREEVD-TFMFE------------GHDTTTSAISFCLYEIS 328
            .|...|||:              |..|.:: ||..|            |.:||::.:::....:.
 Worm   265 ADEHVLSDDPDDFLDAYLLKMQKDKNEGLETTFTLENLAVDMYDLWLGGQETTSTTLNWACACLL 329

  Fly   329 RHPEVQQRLQQEIRDVLGEDRKSPVTLRDLGELKFMENVIKESLRLHPPVPM-IGRWFAEDVEIR 392
            ..|:|....::|:..|.|..|.  ::|.|..|..::..||.|..|....:.| :.|...||..:.
 Worm   330 NRPDVITTAREELIRVTGGHRS--LSLIDRRETPYLSAVISEVQRFASILNMNLFRIIKEDTVVD 392

  Fly   393 GKHIPAGTNFTMGIFVLLRDPEYFESPDEFRPERF----DADVPQIHPYAYIPFSAGPRNCIGQK 453
            |:.:.|||..|..|.::..|.:.|::..|||||||    |.|      ...|||..|.|:|:|:.
 Worm   393 GQPLRAGTAVTAHIAMIHVDEDLFKNHTEFRPERFLENDDLD------KKLIPFGIGRRSCLGES 451

  Fly   454 FAMLEMKSTVSKLLRHFELLPLGPEPR 480
            .|..|:...:..||..::|.|:|..|:
 Worm   452 LAKAELYLVLGNLLLDYDLEPVGEIPK 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_001284806.1 p450 32..495 CDD:278495 112/522 (21%)
cyp-34A1NP_506787.1 p450 26..498 CDD:278495 112/522 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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