DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d2 and cyp-13A3

DIOPT Version :10

Sequence 1:NP_525043.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_496110.1 Gene:cyp-13A3 / 188359 WormBaseID:WBGene00011675 Length:520 Species:Caenorhabditis elegans


Alignment Length:549 Identity:150/549 - (27%)
Similarity:246/549 - (44%) Gaps:89/549 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VVGVLLLVAFATLLLWDF-LWRRRGNGILPGPRPLPFLGNLLMYRGLDPEQIM---DFVKKNQRK 64
            ::.:.|.:...|..||.: .|.|:|   :.|||.|||.|.:..::..:...|:   |:.|    :
 Worm     6 LIAIALFIGVFTYYLWIWSFWMRKG---IKGPRGLPFFGIINAFQSYEKPWILRLGDWTK----E 63

  Fly    65 YGRLYRVWILHQLAVFSTDPRDIEFVLSSQQHITKNNLY-KLLNCWLGD-------GLLMSTGRK 121
            ||.:|......:..:..:||..:..|...|    .:|.| :..|...||       .|:.|.|.:
 Worm    64 YGPMYGFTDGVEKTLVVSDPEFVHEVFVKQ----FDNFYARKQNPLQGDPDKDPRIHLVTSQGHR 124

  Fly   122 WHGRRKIITPTFHFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICLTALDIIAETAMG 186
            |...|.:.:|||..|.|.:.....::..|.|:..|:....|...|:|........:|||.:.|||
 Worm   125 WKRLRTLASPTFSNKSLRKIFSTVEESVAEMMRHLEKGTAGGKTIDILEYYQEFTMDIIGKIAMG 189

  Fly   187 TKINAQ-KNPNLPYVQAV-NDVTNIL-----IKRFIHAWQRVDWIFRLTQPTEAKRQDKAIKVMH 244
            ...:.. :||.|..::|: |...||:     |..|..:..|  |.|     ::.........:||
 Worm   190 QSGSMMFENPWLDKIRAIFNTRGNIIFIICGIVPFTGSIFR--WFF-----SKVPTAQTVTSLMH 247

  Fly   245 DFTENIIRERRETLVNNSKETTPEEEVNFLGQKRRMALLDVLLQSTIDGAPLSDE---------- 299
              |..|      .|....::...:|:............:|:.|....|...|.||          
 Worm   248 --TLEI------ALTKRVEQRAADEKAGIESSGEPQDFIDLFLDVQADTDFLEDETKNGFARSQI 304

  Fly   300 ----------DIREEVDTFMFEGHDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSP-- 352
                      :|..::..|:..|:|||..::|:..|.::||||:|::||:|:      ||:.|  
 Worm   305 VKVDKHLTFDEIIGQLFVFLLAGYDTTALSLSYSSYLLARHPEIQKKLQEEV------DRECPDP 363

  Fly   353 -VTLRDLGELKFMENVIKESLRLHPPVPMI-GRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEY 415
             ||...|.:||:||.||||:|||:|...:: .|...:...:.|..|..|||.....:.|..||::
 Worm   364 EVTFDQLSKLKYMECVIKETLRLYPLASIVHNRKCMKSTTVLGMKIEEGTNVQADTWTLHYDPKF 428

  Fly   416 F-ESPDEFRPERFDA-DVPQIHPYAYIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHFEL------ 472
            : |:.:||:|||::: |...:...||:||..|||.|||.:.|.:|.|..::::|:.:.|      
 Worm   429 WGENANEFKPERWESGDEQAVAKGAYLPFGLGPRICIGMRLAYMEEKMLLAQILKKYSLETTFET 493

  Fly   473 -LPLGPEPRHSMNIVLRSANGVHLGLKPR 500
             :||     ..:.|...:...|||.||||
 Worm   494 HIPL-----KLVGIATTAPTNVHLKLKPR 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_525043.1 CYP4 66..495 CDD:410721 126/476 (26%)
cyp-13A3NP_496110.1 CYP3A-like 63..509 CDD:410678 126/475 (27%)

Return to query results.
Submit another query.