DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d2 and cyp-13A8

DIOPT Version :10

Sequence 1:NP_525043.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_496115.1 Gene:cyp-13A8 / 188358 WormBaseID:WBGene00011674 Length:509 Species:Caenorhabditis elegans


Alignment Length:567 Identity:136/567 - (23%)
Similarity:235/567 - (41%) Gaps:137/567 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLLVAFATLLLWDF-LWRRRGNGILPGPRPLPFLG--NLLMYRGLDPEQIMDFVKKNQRKYGRLY 69
            |:|::..|...|.: .|:|||   ||||..:|..|  ..::.....|...:   :|..::||::|
 Worm     5 LILISIVTYYFWHWTFWKRRG---LPGPWGVPIFGKAGAMLEDSFPPGYTL---QKWTKEYGKIY 63

  Fly    70 RVWILHQLAVFSTDPRDIEFVLSSQQHITKNNLY-KLLNCWLGD-------GLLMSTGRKWHGRR 126
            ......|..:..:||..::.:|..|.    :|.| :..|...||       .::.:.|.:|...|
 Worm    64 GFTEGMQKVMVISDPDLVQEILVKQY----DNFYGRKHNPVQGDPDKDKDIHIVGAQGFRWKRLR 124

  Fly   127 KIITPTFHFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICLTALDIIAETAMGTKINA 191
            .|..|.|....:::.:...:..:..::::|:..::....:|:.........|:|:..|||...:.
 Worm   125 TITAPAFSNGSIKKVLTTMEDSTQELMKKLREESENGKAVNMHLFYQEYTFDVISRVAMGQPDSQ 189

  Fly   192 Q-KNPNLPYVQAVNDVTNILIKRFIH-AWQ-------------RVDWIF---------------- 225
            . |||.|..|:..          |.| .||             .:.|:|                
 Worm   190 MFKNPLLKDVKGF----------FEHNRWQIWMFSGGFPFAVSFLKWLFIKVGKFGAGPFIVVQK 244

  Fly   226 --------RLTQPTEAKRQDKAIKVMHDFTENIIRERRETLVNNSKETTPEEEVNFLGQKRRMAL 282
                    |:.|....|:.........|:.:..:..|.|  |.:..|:..|...:          
 Worm   245 SVTDAVMSRIAQREADKKHGVEPGEAADYIDMFLNARAE--VEHFGESNDEFHKS---------- 297

  Fly   283 LDVLLQSTIDGAPLSDEDIREEVDTFMFEGHDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGE 347
                  |:.:...|:.::|..:...|:..|.|||..::|:..|.::.:|::|.:||.|:      
 Worm   298 ------SSYNNRQLTTQEIISQCFVFLVAGFDTTAISLSYVTYFLALNPKIQSKLQDEV------ 350

  Fly   348 DRKSP---VTLRDLGELKFMENVIKESLRLHPPVPMIGRWFAEDVEIR--------GKHI-PAGT 400
            |::.|   :|...|.:||:|:|||||||||.|        ||.....|        |:.| .||.
 Worm   351 DKECPNDEITFDQLSKLKYMDNVIKESLRLFP--------FASFANSRRCMRNTVIGEQIVEAGV 407

  Fly   401 NFTMGIFVLLRDPEYF-ESPDEFRPERFDADV-PQIHPYAYIPFSAGPRNCIGQKFAMLEMKSTV 463
            :..:..:.|..|...: ...:||:|||:|:.: ||   .||:.|.||||.|:|.:||:||.|..:
 Worm   408 DVMIDTWTLHHDKNVWGNDVEEFKPERWDSPLTPQ---QAYLSFGAGPRVCLGMRFALLEQKGLL 469

  Fly   464 SKLLRHFEL-------LPLGPEPRHSMNIVLRSA---NGVHLGLKPR 500
            |.:|:.:..       ||:        .:|.|:.   ..:.|.||||
 Worm   470 SHILKKYTFETNAKTQLPI--------KLVGRATARPENLFLSLKPR 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d2NP_525043.1 CYP4 66..495 CDD:410721 114/499 (23%)
cyp-13A8NP_496115.1 CYP3A-like 58..500 CDD:410678 115/498 (23%)

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